Unknown,Transcriptomics,Genomics,Proteomics

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RNA-seq of wild-type and Utx- or Hnf1a-deficient mouse pancreas


ABSTRACT: HNF1A and UTX are putative tumor suppressors in pancreatic cancer. In this study, we have combined mouse genetics, transcriptomics and genome binding studies to link HNF1A and UTX in a molecular mechanism that suppresses pancreatic cancer. In this session, we have determined the transcriptome of HNF1A and UTX in the exocrine pancreas. We show that HNF1A recruits UTX to its genomic targets in pancreatic acinar cells, which results in remodeling of the chromatin landscape and activation of a broad transcriptional program of differentiated acinar cells, which in turn indirectly suppresses tumor suppressor pathways.

INSTRUMENT(S): Illumina HiSeq 2500

ORGANISM(S): Mus musculus

SUBMITTER: Jorge Ferrer 

PROVIDER: E-MTAB-7945 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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