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Baseline and Post-Bortezomib gene expression profiling of CD138 purified bone marrow plasma cells from multiple myeloma patients

ABSTRACT: High PSMD4 expression levels in plasma cells are linked to poor prognosis in multiple myeloma. Additional file available-E-TABM-1138.additional.zip

ORGANISM(S): Homo sapiens

SUBMITTER: Pingping Qu

PROVIDER: E-TABM-1138 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Pharmacogenomics of bortezomib test-dosing identifies hyperexpression of proteasome genes, especially PSMD4, as novel high-risk feature in myeloma treated with Total Therapy 3.

Shaughnessy John D JD Qu Pingping P Usmani Saad S Heuck Christoph J CJ Zhang Qing Q Zhou Yiming Y Tian Erming E Hanamura Ichiro I van Rhee Frits F Anaissie Elias E Epstein Joshua J Nair Bijay B Stephens Owen O Williams Ryan R Waheed Sarah S Alsayed Yazan Y Crowley John J Barlogie Bart B

Blood 20110531 13

Gene expression profiling (GEP) of purified plasma cells 48 hours after thalidomide and dexamethasone test doses showed these agents' mechanisms of action and provided prognostic information for untreated myeloma patients on Total Therapy 2 (TT2). Bortezomib was added in Total Therapy 3 (TT3), and 48 hours after bortezomib GEP analysis identified 80 highly survival-discriminatory genes in a training set of 142 TT3A patients that were validated in 128 patients receiving TT3B. The 80-gene GEP mode ...[more]

PMID: 21628408

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Gene Expression Changes in Myeloma Cells Following Short Term In-vivo Pomalidomide (Pom) or Bortezomib (Bor) Exposure

Project description:For Pom pharmacogenomic study, gene expression profiling (GEP) analyses were performed on samples from 18 patients, all of whom had received prior treatment with Len and Bor. CD138-purified plasma cells were collected from patients prior to and 48 hours after the first dose of Pom (4.0 mg/d for 2 days) and samples were hybridized to Affymetrix U133Plus2.0 arrays according to the manufacturer's recommendations. For Bor study, GEP analyses were performed on samples from 25 previously treated patients on Total Therapy 6 (TT6) trial using Affymetrix U133Plus2.0 arrays. Samples were collected prior to and 48 hours post a test dose Bor (1.0mg/m2).

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Transcriptiion profiling by array of human ratiometric mixes of high quality RNA from different tissues using different labeling protocols to provide a mechanism for assessing process improvement

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Expression data of HGF/cMET pathway in prostate cancer DU145 cell line

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A novel nano-immunoassay method for quantification of proteins from CD138-purified myeloma cells: biological and clinical utility.

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