Project description:Masticatory overload on dental implants is one of the causes of marginal bone resorption. The implant-abutment connection (IAC) design plays a critical role in the quality of the stress distribution, and, over the years, different designs were proposed. This study aimed to assess the mechanical behavior of three different types of IAC using a finite element model (FEM) analysis. Three types of two-piece implants were designed: two internal conical connection designs (models A and B) and one internal flat-to-flat connection design (model C). This three-dimensional analysis evaluated the response to static forces on the three models. The strain map, stress analysis, and safety factor were assessed by means of the FEM examination. The FEM analysis indicated that forces are transmitted on the abutment and implant's neck in model B. In models A and C, forces were distributed along the internal screw, abutment areas, and implant's neck. The stress distribution in model B showed a more homogeneous pattern, such that the peak forces were reduced. The conical shape of the head of the internal screw in model B seems to have a keystone role in transferring the forces at the surrounding structures. Further experiments should be carried out in order to confirm the present suppositions.
Project description:Assessment of heart function in zebrafish larvae using electrocardiography (ECG) is a potentially useful tool in developing cardiac treatments and the assessment of drug therapies. In order to better understand how a measured ECG waveform is related to the structure of the heart, its position within the larva and the position of the electrodes, a 3D model of a 3 days post fertilisation (dpf) larval zebrafish was developed to simulate cardiac electrical activity and investigate the voltage distribution throughout the body. The geometry consisted of two main components; the zebrafish body was modelled as a homogeneous volume, while the heart was split into five distinct regions (sinoatrial region, atrial wall, atrioventricular band, ventricular wall and heart chambers). Similarly, the electrical model consisted of two parts with the body described by Laplace's equation and the heart using a bidomain ionic model based upon the Fitzhugh-Nagumo equations. Each region of the heart was differentiated by action potential (AP) parameters and activation wave conduction velocities, which were fitted and scaled based on previously published experimental results. ECG measurements in vivo at different electrode recording positions were then compared to the model results. The model was able to simulate action potentials, wave propagation and all the major features (P wave, R wave, T wave) of the ECG, as well as polarity of the peaks observed at each position. This model was based upon our current understanding of the structure of the normal zebrafish larval heart. Further development would enable us to incorporate features associated with the diseased heart and hence assist in the interpretation of larval zebrafish ECGs in these conditions.
Project description:Three-dimensional (3D) culture systems can mimic certain aspects of the cellular microenvironment found in vivo, but generation, analysis and imaging of current model systems for 3D cellular constructs and tissues remain challenging. This work demonstrates a 3D culture system-Cells-in-Gels-in-Mesh (CiGiM)-that uses stacked sheets of polymer-based mesh to support cells embedded in gels to form tissue-like constructs; the stacked sheets can be disassembled by peeling the sheets apart to analyze cultured cells-layer-by-layer-within the construct. The mesh sheets leave openings large enough for light to pass through with minimal scattering, and thus allowing multiple options for analysis-(i) using straightforward analysis by optical light microscopy, (ii) by high-resolution analysis with fluorescence microscopy, or (iii) with a fluorescence gel scanner. The sheets can be patterned into separate zones with paraffin film-based decals, in order to conduct multiple experiments in parallel; the paraffin-based decal films also block lateral diffusion of oxygen effectively. CiGiM simplifies the generation and analysis of 3D culture without compromising throughput, and quality of the data collected: it is especially useful in experiments that require control of oxygen levels, and isolation of adjacent wells in a multi-zone format.
Project description:One of the great challenges of unconfined seepage through a dam lies in the accurate determination of free surface that depends on the complexity of the seepage model, especially if the model is characterized with complex geometry and sharp variations in permeability distribution. This study presents a practical methodology that combines the adaptive moving-mesh algorithm and the Galerkin finite element method (FEM) to solve an unconfined seepage problem with high efficiency and precision. The methodology employs a set of improvement terms, such as remainder factor, step-size parameter and termination condition, all of which guarantee that the simulation and the refinement fitting can be implemented efficiently until the free surface converges within a given allowable error. In particular, a specialized discussion is presented for the significant relation between the location of the exit point and the corresponding grid fineness. To validate the practicability of the proposed method, a series of examples are performed. Comparing the result with those of other numerical approaches, we conclude that even though the unconfined seepage model may be complicated with arbitrary complex geometry and sharp variations in permeability distribution, the proposed algorithm provides a great improvement in efficiency and accuracy in free-surface searching.
Project description:Groundwater inflow to an underground mine will seriously affect its mining plan and engineering geology safety. Groundwater models are powerful tools commonly used in the mines to develop dewatering strategies. Many mines in the Kolwezi area have been present since the 1950s, and groundwater flow patterns have been significantly influenced by mining activities. A mining plan is developed for an underground mine with overturned syncline strata in Kolwezi, Congo. Previous groundwater models using layered homogeneous media lowered model accuracies. A new three-dimensional groundwater model using FEFLOW, consisting of a combined regionally and locally geology models integrating 16 hydrogeological cross-sections and borehole logging data, are formulated to predict the underground dewatering in the study area. A 31-days pumping tests with 3 pumping wells and 28 observation wells are carried out to estimate the hydrogeological properties. The simulated water level data match the observed data rather well. Under 8 scenarios of possible well designs, the model predicts a possible dewatering capacity greater 23,900 m3/d at the initial stage of mining. The concept of the model and its application can be a reference for other mines with complex geology for mining safety in the region of interest.
Project description:This article provides Abaqus input files and user subroutines for performing finite element simulations of the tricuspid heart valve with an idealized geometry. Additional post-processing steps to obtain a ParaView visualization file (*.vtk) of the deformed geometry are also provided to allow the readers to use the included ParaView state file (*.pvsm) for customizable visualization and evaluation of the simulation results. We expect this first-of-its-kind in-silico benchmark dataset will facilitate user-friendly simulations considering material nonlinearity, leaflet-to-leaflet contact, and large deformations. Additionally, the information included herein can be used to rapidly evaluate other novel in-silico approaches developed for simulating cardiac valve function. The benchmark can be expanded to consider more complex features of the tricuspid valve function, such as the dynamic annulus motion or the time-varying transvalvular pressure. Interested readers are referred to the companion article (Johnson et al., 2021) for an example application of this in-silico tool for isogeometric analysis of tricuspid valves.
Project description:Finite element analysis (FEA) is a commonly used application in biomechanical studies of both extant and fossil taxa to assess stress and strain in solid structures such as bone. FEA can be performed on 3D structures that are generated using various methods, including computed tomography (CT) scans and surface scans. While previous palaeobiological studies have used both CT scanned models and surface scanned models, little research has evaluated to what degree FE results may vary when CT scans and surface scans of the same object are compared. Surface scans do not preserve the internal geometries of 3D structures, which are typically preserved in CT scans. Here, we created 3D models from CT scans and surface scans of the same specimens (crania and mandibles of a Nile crocodile, a green sea turtle, and a monitor lizard) and performed FEA under identical loading parameters. It was found that once surface scanned models are solidified, they output stress and strain distributions and model deformations comparable to their CT scanned counterparts, though differing by notable stress and strain magnitudes in some cases, depending on morphology of the specimen and the degree of reconstruction applied. Despite similarities in overall mechanical behaviour, surface scanned models can differ in exterior shape compared to CT scanned models due to inaccuracies that can occur during scanning and reconstruction, resulting in local differences in stress distribution. Solid-fill surface scanned models generally output lower stresses compared to CT scanned models due to their compact interiors, which must be accounted for in studies that use both types of scans.
Project description:Transcatheter aortic valve replacement has proved its safety and effectiveness in intermediate- to high-risk and inoperable patients with severe aortic stenosis. However, despite current guideline recommendations, the use of transcatheter aortic valve replacement (TAVR) to treat severe aortic valve stenosis caused by degenerative leaflet thickening and calcification has not been widely adopted in low-risk patients. This reluctance among both cardiac surgeons and cardiologists could be due to concerns regarding clinical and subclinical valve thrombosis. Stent performance alongside increased aortic root and leaflet stresses in surgical bioprostheses has been correlated with complications such as thrombosis, migration and structural valve degeneration. Self-expandable catheter-based aortic valve replacement (Medtronic, Minneapolis, MN, USA), which was received by patients who developed transcatheter heart valve thrombosis, was investigated using high-resolution biomodelling from computed tomography scanning. Calcific blocks were extracted from a 250 CT multi-slice image for precise three-dimensional geometry image reconstruction of the root and leaflets. Distortion of the stent was observed with incomplete cranial and caudal expansion of the device. The incomplete deployment of the stent was evident in the presence of uncrushed refractory bulky calcifications. This resulted in incomplete alignment of the device within the aortic root and potential dislodgment. A Finite Element Analysis (FEA) investigation can anticipate the presence of calcified refractory blocks, the deformation of the prosthetic stent and the development of paravalvular orifice, and it may prevent subclinical and clinical TAVR thrombosis. Here we clearly demonstrate that using exact geometry from high-resolution CT scans in association with FEA allows detection of persistent bulky calcifications that may contribute to thrombus formation after TAVR procedure.
Project description:Brittle deformation can saturate the Earth's crust with faults and fractures in an apparently chaotic fashion. The details of brittle deformational histories and implications on, for example, seismotectonics and landscape, can thus be difficult to untangle. Fortunately, brittle faults archive subtle details of the stress and physical/chemical conditions at the time of initial strain localization and eventual subsequent slip(s). Hence, reading those archives offers the possibility to deconvolute protracted brittle deformation. Here we report K-Ar isotopic dating of synkinematic/authigenic illite coupled with structural analysis to illustrate an innovative approach to the high-resolution deconvolution of brittle faulting and fluid-driven alteration of a reactivated fault in western Norway. Permian extension preceded coaxial reactivation in the Jurassic and Early Cretaceous fluid-related alteration with pervasive clay authigenesis. This approach represents important progress towards time-constrained structural models, where illite characterization and K-Ar analysis are a fundamental tool to date faulting and alteration in crystalline rocks.
Project description:Slow-slip events are earthquake-like events only with much lower slip rates. While peak coseismic velocities can reach tens of meters per second, slow-slip is on the order of 10-7±2 m/s and may last for days to weeks. Under the rate-and-state model of fault friction, slow-slip is produced only when the asperity size is commensurate with the critical nucleation size, a function of frictional properties. However, it is unlikely that all subduction zones embody the same frictional properties. In addition to friction, plastic flow of antigorite-rich serpentinite may significantly influence the dynamics of fault slip near the mantle wedge corner. Here, we show that the range of frictional parameters that generate slow slip is widened in the presence of a serpentinized layer along the subduction plate interface. We observe increased stability and damping of fast ruptures in a semi-brittle fault zone governed by both brittle and viscoelastic constitutive response. The rate of viscous serpentinite flow, governed by dislocation creep, is enhanced by high ambient temperatures. When effective viscosity is taken to be dynamic, long-term slow slip events spontaneously emerge. Integration of rheology, thermal effects, and other microphysical processes with rate-and-state friction may yield further insight into the phenomenology of slow slip.