Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Draft genome sequences of five multidrug-resistant Escherichia coli strains isolated from vegetable samples in Bangladesh.

ABSTRACT: Reports indicate that vegetables are becoming a source of multidrug-resistant (MDR) bacteria, including Escherichia coli. Here, we present genome sequences of five MDR E. coli strains to assist future genomic analysis of this bacterium. These E. coli strains were isolated from vegetable samples of different gardening systems in Dhaka, Bangladesh.

SUBMITTER: Islam MS

PROVIDER: S-EPMC10793266 | biostudies-literature | 2024 Jan

REPOSITORIES: biostudies-literature

ACCESS DATA

Json Xml

Publications

Draft genome sequences of five multidrug-resistant Escherichia coli strains isolated from vegetable samples in Bangladesh.

Islam Md Saiful MS Pramanik Pritom Kumar PK Rana Md Liton ML Ramasamy Srinivasan S Schreinemachers Pepijn P Oliva Ricardo R Rahman Md Tanvir MT

Microbiology resource announcements 20231214 1

Reports indicate that vegetables are becoming a source of multidrug-resistant (MDR) bacteria, including Escherichia coli. Here, we present genome sequences of five MDR E. coli strains to assist future genomic analysis of this bacterium. These E. coli strains were isolated from vegetable samples of different gardening systems in Dhaka, Bangladesh. ...[more]

PMID: 38095874

Similar Datasets

Draft Genome Sequences of Multidrug-Resistant Shigella Strains Isolated from Diarrheal Patients in Bangladesh.

Project description:The emergence of multidrug-resistant (MDR) Shigella strains has impaired the efficacy of first-line antimicrobials and exacerbated diarrhea-associated morbidity and mortality worldwide. We report the draft genome sequences of 11 MDR Shigella strains isolated from the stool specimens of diarrheal patients in Bangladesh.

| S-EPMC8530036 | biostudies-literature

Draft genome sequences of five Lactobacillus gasseri strains isolated from voided urine samples.

Project description:Lactobacillus gasseri is a member of the gut, oral, and female urogenital microbiota. Here, we present the draft genome assemblies of L. gasseri UMB1549, UMB1579, UMB1644, UMB3348, and UMB5890, which were isolated from voided urine samples from females with Type 2 diabetes.

| S-EPMC10868221 | biostudies-literature

Draft Genome Sequences of Multidrug-Resistant Escherichia coli Strains Isolated from River Water in Malaysia.

Project description:Antimicrobial resistance has become a primary concern in clinical and public health. Escherichia coli is one of the bacteria that carries and disseminates antimicrobial resistance genes to the community. Here, we report the draft genome sequence of three multidrug-resistant E. coli strains that were isolated from river water in Malaysia.

| S-EPMC9302170 | biostudies-literature

Draft Genome Sequences of 10 Multidrug-Resistant Escherichia coli Strains Isolated from Piglets in Peru.

Project description:Pathogenic Escherichia coli frequently causes diarrhea on pig farms. Here, we report the draft genome sequences of 10 strains of multidrug-resistant E. coli isolated from piglets.

| S-EPMC9583804 | biostudies-literature

Draft Genome Sequences of Five Fungal Strains Isolated from Kefir.

Project description:We present the annotated draft genome sequences of five fungal strains isolated from kefir grains. These isolates included three ascomycetous (Candida californica, Kazachstania exigua, and Kazachstania unispora) and one basidiomycetous (Rhodotorula mucilaginosa) species. The results revealed a detailed overview of the metabolic features of kefir fungi that will be potentially useful in biotechnological applications.

| S-EPMC8201632 | biostudies-literature

Draft Genome Sequences of Multidrug-Resistant Escherichia coli Isolated from River Water.

Project description:The spread of antibiotic resistance poses a critical challenge worldwide. Contaminated environments can become reservoirs, spreading antibiotic-resistant bacteria and genetic determinants of resistance to humans directly or indirectly. Here, we report the draft genome sequence, the resistome, virulence genes, and sequence types of seven multidrug-resistant Escherichia coli strains isolated from river water.

| S-EPMC9670951 | biostudies-literature

Draft Genome Sequences of Five Novel Polyketide Synthetase-Containing Mouse Escherichia coli Strains.

Project description:We report herein the draft genomes of five novel Escherichia coli strains isolated from surveillance and experimental mice housed at MIT and the Whitehead Institute and describe their genomic characteristics in context with the polyketide synthetase (PKS)-containing pathogenic E. coli strains NC101, IHE3034, and A192PP.

| S-EPMC5054322 | biostudies-literature

Draft Genome Sequences of Five Carnobacterium sp. Strains Isolated from Freshwater Ponds in Belgium.

Project description:Strains belonging to the genus Carnobacterium are Gram-positive bacteria that are widely distributed in the environment. Here, we report the draft genome sequences of five Carnobacterium strains isolated from freshwater ponds located in Flanders, Belgium, and sequenced on an Illumina HiSeq 4000 platform.

| S-EPMC7303419 | biostudies-literature

Draft Genome Sequences of Five Vibrio neptunius Strains Isolated from Hatcheries of Bivalve Mollusks.

Project description:Vibrio neptunius is a Gram-negative bacterium that has been shown to cause disease in marine bivalve mollusk larvae. Here, we report the draft genome sequences and annotations of five V. neptunius strains isolated from larvae of European oyster (Ostrea edulis) and Manila clam (Ruditapes philippinarum) at hatcheries in Galicia, northwest Spain.

| S-EPMC8086213 | biostudies-literature

Draft Whole-Genome Sequences of Multidrug-Resistant Escherichia coli O157:H7 Strains Isolated from Feedlot Cattle Treated with Growth-Promoting Agents.

Project description:Enterohemorrhagic Escherichia coli serotype O157:H7 is a major cause of foodborne outbreaks and hemolytic-uremic syndrome. Here, we report the draft genome sequences of three antibiotic-resistant E. coli O157:H7 strains isolated from feedlot cattle. These draft genome sequences will aid in the development of sequence-based tools for the detection of virulence and antimicrobial resistance genotypes.

| S-EPMC5442372 | biostudies-literature