Ontology highlight
ABSTRACT:
SUBMITTER: Rattei T
PROVIDER: S-EPMC1347468 | biostudies-literature | 2006 Jan
REPOSITORIES: biostudies-literature
Rattei Thomas T Arnold Roland R Tischler Patrick P Lindner Dominik D Stümpflen Volker V Mewes H Werner HW
Nucleic acids research 20060101 Database issue
Similarity Matrix of Proteins (SIMAP) (http://mips.gsf.de/simap) provides a database based on a pre-computed similarity matrix covering the similarity space formed by >4 million amino acid sequences from public databases and completely sequenced genomes. The database is capable of handling very large datasets and is updated incrementally. For sequence similarity searches and pairwise alignments, we implemented a grid-enabled software system, which is based on FASTA heuristics and the Smith-Water ...[more]