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Precise centromere mapping using a combination of repeat junction markers and chromatin immunoprecipitation-polymerase chain reaction.


ABSTRACT: Centromeres are difficult to map even in species where genetic resolution is excellent. Here we show that junctions between repeats provide reliable single-copy markers for recombinant inbred mapping within centromeres and pericentromeric heterochromatin. Repeat junction mapping was combined with anti-CENH3-mediated ChIP to provide a definitive map position for maize centromere 8.

SUBMITTER: Luce AC 

PROVIDER: S-EPMC1602074 | biostudies-literature | 2006 Oct

REPOSITORIES: biostudies-literature

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Precise centromere mapping using a combination of repeat junction markers and chromatin immunoprecipitation-polymerase chain reaction.

Luce Amy C AC   Sharma Anupma A   Mollere Oliver S B OS   Wolfgruber Thomas K TK   Nagaki Kiyotaka K   Jiang Jiming J   Presting Gernot G GG   Dawe R Kelly RK  

Genetics 20060901 2


Centromeres are difficult to map even in species where genetic resolution is excellent. Here we show that junctions between repeats provide reliable single-copy markers for recombinant inbred mapping within centromeres and pericentromeric heterochromatin. Repeat junction mapping was combined with anti-CENH3-mediated ChIP to provide a definitive map position for maize centromere 8. ...[more]

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