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Accurate prediction of gene feedback circuit behavior from component properties.

ABSTRACT: A basic assumption underlying synthetic biology is that analysis of genetic circuit elements, such as regulatory proteins and promoters, can be used to understand and predict the behavior of circuits containing those elements. To test this assumption, we used time-lapse fluorescence microscopy to quantitatively analyze two autoregulatory negative feedback circuits. By measuring the gene regulation functions of the corresponding repressor-promoter interactions, we accurately predicted the expression level of the autoregulatory feedback loops, in molecular units. This demonstration that quantitative characterization of regulatory elements can predict the behavior of genetic circuits supports a fundamental requirement of synthetic biology.

SUBMITTER: Rosenfeld N

PROVIDER: S-EPMC2132446 | biostudies-literature | 2007

REPOSITORIES: biostudies-literature

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Accurate prediction of gene feedback circuit behavior from component properties.

Rosenfeld Nitzan N Young Jonathan W JW Alon Uri U Swain Peter S PS Elowitz Michael B MB

Molecular systems biology 20071113

A basic assumption underlying synthetic biology is that analysis of genetic circuit elements, such as regulatory proteins and promoters, can be used to understand and predict the behavior of circuits containing those elements. To test this assumption, we used time-lapse fluorescence microscopy to quantitatively analyze two autoregulatory negative feedback circuits. By measuring the gene regulation functions of the corresponding repressor-promoter interactions, we accurately predicted the express ...[more]

PMID: 18004276

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