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In silico feedback for in vivo regulation of a gene expression circuit.


ABSTRACT: We show that difficulties in regulating cellular behavior with synthetic biological circuits may be circumvented using in silico feedback control. By tracking a circuit's output in Saccharomyces cerevisiae in real time, we precisely control its behavior using an in silico feedback algorithm to compute regulatory inputs implemented through a genetically encoded light-responsive module. Moving control functions outside the cell should enable more sophisticated manipulation of cellular processes whenever real-time measurements of cellular variables are possible.

SUBMITTER: Milias-Argeitis A 

PROVIDER: S-EPMC4565053 | biostudies-literature | 2011 Nov

REPOSITORIES: biostudies-literature

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In silico feedback for in vivo regulation of a gene expression circuit.

Milias-Argeitis Andreas A   Summers Sean S   Stewart-Ornstein Jacob J   Zuleta Ignacio I   Pincus David D   El-Samad Hana H   Khammash Mustafa M   Lygeros John J  

Nature biotechnology 20111106 12


We show that difficulties in regulating cellular behavior with synthetic biological circuits may be circumvented using in silico feedback control. By tracking a circuit's output in Saccharomyces cerevisiae in real time, we precisely control its behavior using an in silico feedback algorithm to compute regulatory inputs implemented through a genetically encoded light-responsive module. Moving control functions outside the cell should enable more sophisticated manipulation of cellular processes wh  ...[more]

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