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Discrimination of herpes simplex virus type 2 strains by nucleotide sequence variations.

ABSTRACT: We determined the polymorphous 400-bp regions in UL53, US1, and US4 for the discrimination of herpes simplex virus type 2 (HSV-2) strains. Thirty-six HSV-2 clinical strains could be differentiated into 35 groups using these three regions and into 36 groups by additional analysis of three noncoding regions previously reported as polymorphous.

SUBMITTER: Kaneko H 

PROVIDER: S-EPMC2238078 | biostudies-literature | 2008 Feb

REPOSITORIES: biostudies-literature

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Discrimination of herpes simplex virus type 2 strains by nucleotide sequence variations.

Kaneko Hisatoshi H   Kawana Takashi T   Ishioka Ken K   Fukushima Eiko E   Suzutani Tatsuo T  

Journal of clinical microbiology 20071212 2

We determined the polymorphous 400-bp regions in UL53, US1, and US4 for the discrimination of herpes simplex virus type 2 (HSV-2) strains. Thirty-six HSV-2 clinical strains could be differentiated into 35 groups using these three regions and into 36 groups by additional analysis of three noncoding regions previously reported as polymorphous. ...[more]

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