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Single molecule nanometronome.


ABSTRACT: We constructed a DNA-based nanomechanical device called the nanometronome. Our device is made by introducing complementary single-stranded overhangs at the two arms of the DNA four-way junction. The ticking rates of this stochastic metronome depend on ion concentrations and can be changed by a set of DNA-based switches to deactivate/reactivate the sticky end. Since the device displays clearly distinguishable responses even with a single base pair difference, it may lead to a single molecule sensor of minute sequence differences of a target DNA.

SUBMITTER: Buranachai C 

PROVIDER: S-EPMC2597577 | biostudies-literature | 2006 Mar

REPOSITORIES: biostudies-literature

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Single molecule nanometronome.

Buranachai Chittanon C   McKinney Sean A SA   Ha Taekjip T  

Nano letters 20060301 3


We constructed a DNA-based nanomechanical device called the nanometronome. Our device is made by introducing complementary single-stranded overhangs at the two arms of the DNA four-way junction. The ticking rates of this stochastic metronome depend on ion concentrations and can be changed by a set of DNA-based switches to deactivate/reactivate the sticky end. Since the device displays clearly distinguishable responses even with a single base pair difference, it may lead to a single molecule sens  ...[more]

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