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In vivo evolution of butane oxidation by terminal alkane hydroxylases AlkB and CYP153A6.

ABSTRACT: Enzymes of the AlkB and CYP153 families catalyze the first step in the catabolism of medium-chain-length alkanes, selective oxidation of the alkane to the 1-alkanol, and enable their host organisms to utilize alkanes as carbon sources. Small, gaseous alkanes, however, are converted to alkanols by evolutionarily unrelated methane monooxygenases. Propane and butane can be oxidized by CYP enzymes engineered in the laboratory, but these produce predominantly the 2-alkanols. Here we report the in vivo-directed evolution of two medium-chain-length terminal alkane hydroxylases, the integral membrane di-iron enzyme AlkB from Pseudomonas putida GPo1 and the class II-type soluble CYP153A6 from Mycobacterium sp. strain HXN-1500, to enhance their activity on small alkanes. We established a P. putida evolution system that enables selection for terminal alkane hydroxylase activity and used it to select propane- and butane-oxidizing enzymes based on enhanced growth complementation of an adapted P. putida GPo12(pGEc47 Delta B) strain. The resulting enzymes exhibited higher rates of 1-butanol production from butane and maintained their preference for terminal hydroxylation. This in vivo evolution system could be useful for directed evolution of enzymes that function efficiently to hydroxylate small alkanes in engineered hosts.

SUBMITTER: Koch DJ

PROVIDER: S-EPMC2620723 | biostudies-literature | 2009 Jan

REPOSITORIES: biostudies-literature

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In vivo evolution of butane oxidation by terminal alkane hydroxylases AlkB and CYP153A6.

Koch Daniel J DJ Chen Mike M MM van Beilen Jan B JB Arnold Frances H FH

Applied and environmental microbiology 20081114 2

Enzymes of the AlkB and CYP153 families catalyze the first step in the catabolism of medium-chain-length alkanes, selective oxidation of the alkane to the 1-alkanol, and enable their host organisms to utilize alkanes as carbon sources. Small, gaseous alkanes, however, are converted to alkanols by evolutionarily unrelated methane monooxygenases. Propane and butane can be oxidized by CYP enzymes engineered in the laboratory, but these produce predominantly the 2-alkanols. Here we report the in viv ...[more]

PMID: 19011057

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Project description:The well-defined particle morphology of crystalline MnWO4 catalysts investigated in the present study facilitates obtaining insight into the origin of selectivity limitations in alkane oxidation. Hydrothermal synthesis at variable pH values granted access to a series of phase-pure MnWO4 catalysts with particles ranging from cube-like (aspect ratio 1.5) to rod- or needle-like (aspect ratio 6.8) shapes. Kinetic studies reveal a strong dependence of the propane consumption rate on the particle shape. The true origin of the structure sensitivity was unraveled by comprehensive bulk and surface analysis using nitrogen adsorption, XRD, SEM, ADF-STEM, STEM-EELS, XPS, multi-laser excitation Raman and DRIFT/operando FTIR spectroscopies, temperature-programmed oxidation (TPO), in situ NEXAFS, and DFT calculations. The active phase is composed of a thin manganese oxy-hydroxide layer formed on the surface of crystalline MnWO4. The differences in catalytic performance within the series clearly illustrate that the structural motif as the most popular descriptor in oxidation catalysis is not essential, since all MnWO4 catalysts in the series under study exhibit the same bulk crystal structure and bulk chemical composition and are phase pure and homogenous. The variable particle shape serves as a proxy that reflects the formation of varying abundance of redox active Mn2+/Mn3+ surface sites, which correlates with catalytic activity. Operando FTIR spectroscopy directly confirms the formation of Mn-OH surface species by abstraction of hydrogen atoms from the propane molecule on nucleophilic oxygen atoms and suggests that active site regeneration occurs via oxidative dehydrogenation of Mn-OH species indicating a single-site nature of the active sites that does not allow four-electron reduction of molecular oxygen. Instead, intermediates are created that cause side reactions and lower the selectivity. The findings highlight fundamental design criteria that may be applied to advance the development of new alkane oxidation catalysts with improved selectivity.

Dataset Information

In vivo evolution of butane oxidation by terminal alkane hydroxylases AlkB and CYP153A6.

Publications

In vivo evolution of butane oxidation by terminal alkane hydroxylases AlkB and CYP153A6.

Similar Datasets

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