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MachiBase: a Drosophila melanogaster 5'-end mRNA transcription database.


ABSTRACT: MachiBase (http://machibase.gi.k.u-tokyo.ac.jp/) provides a comprehensive and freely accessible resource regarding Drosophila melanogaster 5'-end mRNA transcription at different developmental states, supporting studies on the variabilities of promoter transcriptional activities and gene-expression profiles in the fruitfly. The data were generated in conjunction with the recently developed high-throughput genome sequencer Illumina/Solexa using a newly developed 5'-end mRNA collection method.

SUBMITTER: Ahsan B 

PROVIDER: S-EPMC2686457 | biostudies-literature | 2009 Jan

REPOSITORIES: biostudies-literature

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MachiBase: a Drosophila melanogaster 5'-end mRNA transcription database.

Ahsan Budrul B   Saito Taro L TL   Hashimoto Shin-ichi S   Muramatsu Keigo K   Tsuda Manabu M   Sasaki Atsushi A   Matsushima Kouji K   Aigaki Toshiro T   Morishita Shinichi S  

Nucleic acids research 20081008 Database issue


MachiBase (http://machibase.gi.k.u-tokyo.ac.jp/) provides a comprehensive and freely accessible resource regarding Drosophila melanogaster 5'-end mRNA transcription at different developmental states, supporting studies on the variabilities of promoter transcriptional activities and gene-expression profiles in the fruitfly. The data were generated in conjunction with the recently developed high-throughput genome sequencer Illumina/Solexa using a newly developed 5'-end mRNA collection method. ...[more]

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