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Saint: a lightweight integration environment for model annotation.


ABSTRACT: Saint is a web application which provides a lightweight annotation integration environment for quantitative biological models. The system enables modellers to rapidly mark up models with biological information derived from a range of data sources.Saint is freely available for use on the web at http://www.cisban.ac.uk/saint. The web application is implemented in Google Web Toolkit and Tomcat, with all major browsers supported. The Java source code is freely available for download at http://saint-annotate.sourceforge.net. The Saint web server requires an installation of libSBML and has been tested on Linux (32-bit Ubuntu 8.10 and 9.04).

SUBMITTER: Lister AL 

PROVIDER: S-EPMC2773255 | biostudies-literature | 2009 Nov

REPOSITORIES: biostudies-literature

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Saint: a lightweight integration environment for model annotation.

Lister Allyson L AL   Pocock Matthew M   Taschuk Morgan M   Wipat Anil A  

Bioinformatics (Oxford, England) 20090904 22


<h4>Unlabelled</h4>Saint is a web application which provides a lightweight annotation integration environment for quantitative biological models. The system enables modellers to rapidly mark up models with biological information derived from a range of data sources.<h4>Availability and implementation</h4>Saint is freely available for use on the web at http://www.cisban.ac.uk/saint. The web application is implemented in Google Web Toolkit and Tomcat, with all major browsers supported. The Java so  ...[more]

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