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Genome-wide association study of follicular lymphoma identifies a risk locus at 6p21.32.


ABSTRACT: To identify susceptibility loci for non-Hodgkin lymphoma subtypes, we conducted a three-stage genome-wide association study. We identified two variants associated with follicular lymphoma at 6p21.32 (rs10484561, combined P = 1.12 x 10(-29) and rs7755224, combined P = 2.00 x 10(-19); r(2) = 1.0), supporting the idea that major histocompatibility complex genetic variation influences follicular lymphoma susceptibility. We also found confirmatory evidence of a previously reported association between chronic lymphocytic leukemia/small lymphocytic lymphoma and rs735665 (combined P = 4.24 x 10(-9)).

SUBMITTER: Conde L 

PROVIDER: S-EPMC2913472 | biostudies-literature | 2010 Aug

REPOSITORIES: biostudies-literature

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Genome-wide association study of follicular lymphoma identifies a risk locus at 6p21.32.

Conde Lucia L   Halperin Eran E   Akers Nicholas K NK   Brown Kevin M KM   Smedby Karin E KE   Rothman Nathaniel N   Nieters Alexandra A   Slager Susan L SL   Brooks-Wilson Angela A   Agana Luz L   Riby Jacques J   Liu Jianjun J   Adami Hans-Olov HO   Darabi Hatef H   Hjalgrim Henrik H   Low Hui-Qi HQ   Humphreys Keith K   Melbye Mads M   Chang Ellen T ET   Glimelius Bengt B   Cozen Wendy W   Davis Scott S   Hartge Patricia P   Morton Lindsay M LM   Schenk Maryjean M   Wang Sophia S SS   Armstrong Bruce B   Kricker Anne A   Milliken Sam S   Purdue Mark P MP   Vajdic Claire M CM   Boyle Peter P   Lan Qing Q   Zahm Shelia H SH   Zhang Yawei Y   Zheng Tongzhang T   Becker Nikolaus N   Benavente Yolanda Y   Boffetta Paolo P   Brennan Paul P   Butterbach Katja K   Cocco Pierluigi P   Foretova Lenka L   Maynadié Marc M   de Sanjosé Silvia S   Staines Anthony A   Spinelli John J JJ   Achenbach Sara J SJ   Call Timothy G TG   Camp Nicola J NJ   Glenn Martha M   Caporaso Neil E NE   Cerhan James R JR   Cunningham Julie M JM   Goldin Lynn R LR   Hanson Curtis A CA   Kay Neil E NE   Lanasa Mark C MC   Leis Jose F JF   Marti Gerald E GE   Rabe Kari G KG   Rassenti Laura Z LZ   Spector Logan G LG   Strom Sara S SS   Vachon Celine M CM   Weinberg J Brice JB   Holly Elizabeth A EA   Chanock Stephen S   Smith Martyn T MT   Bracci Paige M PM   Skibola Christine F CF  

Nature genetics 20100718 8


To identify susceptibility loci for non-Hodgkin lymphoma subtypes, we conducted a three-stage genome-wide association study. We identified two variants associated with follicular lymphoma at 6p21.32 (rs10484561, combined P = 1.12 x 10(-29) and rs7755224, combined P = 2.00 x 10(-19); r(2) = 1.0), supporting the idea that major histocompatibility complex genetic variation influences follicular lymphoma susceptibility. We also found confirmatory evidence of a previously reported association between  ...[more]

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