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Complete genome sequence of Rhodothermus marinus type strain (R-10).


ABSTRACT: Rhodothermus marinus Alfredsson et al. 1995 is the type species of the genus and is of phylogenetic interest because the Rhodothermaceae represent the deepest lineage in the phylum Bacteroidetes. R. marinus R-10(T) is a Gram-negative, non-motile, non-spore-forming bacterium isolated from marine hot springs off the coast of Iceland. Strain R-10(T) is strictly aerobic and requires slightly halophilic conditions for growth. Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first complete genome sequence of the genus Rhodothermus, and only the second sequence from members of the family Rhodothermaceae. The 3,386,737 bp genome (including a 125 kb plasmid) with its 2914 protein-coding and 48 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.

SUBMITTER: Nolan M 

PROVIDER: S-EPMC3035238 | biostudies-literature | 2009 Dec

REPOSITORIES: biostudies-literature

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Complete genome sequence of Rhodothermus marinus type strain (R-10).

Nolan Matt M   Tindall Brian J BJ   Pomrenke Helga H   Lapidus Alla A   Copeland Alex A   Glavina Del Rio Tijana T   Lucas Susan S   Chen Feng F   Tice Hope H   Cheng Jan-Fang JF   Saunders Elizabeth E   Han Cliff C   Bruce David D   Goodwin Lynne L   Chain Patrick P   Pitluck Sam S   Ovchinikova Galina G   Pati Amrita A   Ivanova Natalia N   Mavromatis Konstantinos K   Chen Amy A   Palaniappan Krishna K   Land Miriam M   Hauser Loren L   Chang Yun-Juan YJ   Jeffries Cynthia D CD   Brettin Thomas T   Göker Markus M   Bristow James J   Eisen Jonathan A JA   Markowitz Victor V   Hugenholtz Philip P   Kyrpides Nikos C NC   Klenk Hans-Peter HP   Detter John C JC  

Standards in genomic sciences 20091229 3


Rhodothermus marinus Alfredsson et al. 1995 is the type species of the genus and is of phylogenetic interest because the Rhodothermaceae represent the deepest lineage in the phylum Bacteroidetes. R. marinus R-10(T) is a Gram-negative, non-motile, non-spore-forming bacterium isolated from marine hot springs off the coast of Iceland. Strain R-10(T) is strictly aerobic and requires slightly halophilic conditions for growth. Here we describe the features of this organism, together with the complete  ...[more]

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