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Multiple loci associated with indices of renal function and chronic kidney disease.


ABSTRACT: Chronic kidney disease (CKD) has a heritable component and is an important global public health problem because of its high prevalence and morbidity. We conducted genome-wide association studies (GWAS) to identify susceptibility loci for glomerular filtration rate, estimated by serum creatinine (eGFRcrea) and cystatin C (eGFRcys), and CKD (eGFRcrea < 60 ml/min/1.73 m(2)) in European-ancestry participants of four population-based cohorts (ARIC, CHS, FHS, RS; n = 19,877; 2,388 CKD cases), and tested for replication in 21,466 participants (1,932 CKD cases). We identified significant SNP associations (P < 5 × 10(-8)) with CKD at the UMOD locus, with eGFRcrea at UMOD, SHROOM3 and GATM-SPATA5L1, and with eGFRcys at CST and STC1. UMOD encodes the most common protein in human urine, Tamm-Horsfall protein, and rare mutations in UMOD cause mendelian forms of kidney disease. Our findings provide new insights into CKD pathogenesis and underscore the importance of common genetic variants influencing renal function and disease.

SUBMITTER: Kottgen A 

PROVIDER: S-EPMC3039280 | biostudies-literature | 2009 Jun

REPOSITORIES: biostudies-literature

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Multiple loci associated with indices of renal function and chronic kidney disease.

Köttgen Anna A   Glazer Nicole L NL   Dehghan Abbas A   Hwang Shih-Jen SJ   Katz Ronit R   Li Man M   Yang Qiong Q   Gudnason Vilmundur V   Launer Lenore J LJ   Harris Tamara B TB   Smith Albert V AV   Arking Dan E DE   Astor Brad C BC   Boerwinkle Eric E   Ehret Georg B GB   Ruczinski Ingo I   Scharpf Robert B RB   Chen Yii-Der Ida YD   de Boer Ian H IH   Haritunians Talin T   Lumley Thomas T   Sarnak Mark M   Siscovick David D   Benjamin Emelia J EJ   Levy Daniel D   Upadhyay Ashish A   Aulchenko Yurii S YS   Hofman Albert A   Rivadeneira Fernando F   Uitterlinden André G AG   van Duijn Cornelia M CM   Chasman Daniel I DI   Paré Guillaume G   Ridker Paul M PM   Kao W H Linda WH   Witteman Jacqueline C JC   Coresh Josef J   Shlipak Michael G MG   Fox Caroline S CS  

Nature genetics 20090510 6


Chronic kidney disease (CKD) has a heritable component and is an important global public health problem because of its high prevalence and morbidity. We conducted genome-wide association studies (GWAS) to identify susceptibility loci for glomerular filtration rate, estimated by serum creatinine (eGFRcrea) and cystatin C (eGFRcys), and CKD (eGFRcrea < 60 ml/min/1.73 m(2)) in European-ancestry participants of four population-based cohorts (ARIC, CHS, FHS, RS; n = 19,877; 2,388 CKD cases), and test  ...[more]

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