Unknown

Dataset Information

0

Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium.


ABSTRACT: Fusarium species are among the most important phytopathogenic and toxigenic fungi. To understand the molecular underpinnings of pathogenicity in the genus Fusarium, we compared the genomes of three phenotypically diverse species: Fusarium graminearum, Fusarium verticillioides and Fusarium oxysporum f. sp. lycopersici. Our analysis revealed lineage-specific (LS) genomic regions in F. oxysporum that include four entire chromosomes and account for more than one-quarter of the genome. LS regions are rich in transposons and genes with distinct evolutionary profiles but related to pathogenicity, indicative of horizontal acquisition. Experimentally, we demonstrate the transfer of two LS chromosomes between strains of F. oxysporum, converting a non-pathogenic strain into a pathogen. Transfer of LS chromosomes between otherwise genetically isolated strains explains the polyphyletic origin of host specificity and the emergence of new pathogenic lineages in F. oxysporum. These findings put the evolution of fungal pathogenicity into a new perspective.

SUBMITTER: Ma LJ 

PROVIDER: S-EPMC3048781 | biostudies-literature | 2010 Mar

REPOSITORIES: biostudies-literature

altmetric image

Publications

Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium.

Ma Li-Jun LJ   van der Does H Charlotte HC   Borkovich Katherine A KA   Coleman Jeffrey J JJ   Daboussi Marie-Josée MJ   Di Pietro Antonio A   Dufresne Marie M   Freitag Michael M   Grabherr Manfred M   Henrissat Bernard B   Houterman Petra M PM   Kang Seogchan S   Shim Won-Bo WB   Woloshuk Charles C   Xie Xiaohui X   Xu Jin-Rong JR   Antoniw John J   Baker Scott E SE   Bluhm Burton H BH   Breakspear Andrew A   Brown Daren W DW   Butchko Robert A E RA   Chapman Sinead S   Coulson Richard R   Coutinho Pedro M PM   Danchin Etienne G J EG   Diener Andrew A   Gale Liane R LR   Gardiner Donald M DM   Goff Stephen S   Hammond-Kosack Kim E KE   Hilburn Karen K   Hua-Van Aurélie A   Jonkers Wilfried W   Kazan Kemal K   Kodira Chinnappa D CD   Koehrsen Michael M   Kumar Lokesh L   Lee Yong-Hwan YH   Li Liande L   Manners John M JM   Miranda-Saavedra Diego D   Mukherjee Mala M   Park Gyungsoon G   Park Jongsun J   Park Sook-Young SY   Proctor Robert H RH   Regev Aviv A   Ruiz-Roldan M Carmen MC   Sain Divya D   Sakthikumar Sharadha S   Sykes Sean S   Schwartz David C DC   Turgeon B Gillian BG   Wapinski Ilan I   Yoder Olen O   Young Sarah S   Zeng Qiandong Q   Zhou Shiguo S   Galagan James J   Cuomo Christina A CA   Kistler H Corby HC   Rep Martijn M  

Nature 20100301 7287


Fusarium species are among the most important phytopathogenic and toxigenic fungi. To understand the molecular underpinnings of pathogenicity in the genus Fusarium, we compared the genomes of three phenotypically diverse species: Fusarium graminearum, Fusarium verticillioides and Fusarium oxysporum f. sp. lycopersici. Our analysis revealed lineage-specific (LS) genomic regions in F. oxysporum that include four entire chromosomes and account for more than one-quarter of the genome. LS regions are  ...[more]

Similar Datasets

| S-EPMC7214479 | biostudies-literature
| S-EPMC7149415 | biostudies-literature
| S-EPMC6200044 | biostudies-other
| S-EPMC4640148 | biostudies-literature
| S-EPMC4224348 | biostudies-literature
| S-EPMC4141962 | biostudies-literature
| S-EPMC4468381 | biostudies-literature
| S-EPMC8905617 | biostudies-literature
| S-EPMC5567276 | biostudies-literature
| S-EPMC7818268 | biostudies-literature