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Efficient targeted gene disruption in the soma and germ line of the frog Xenopus tropicalis using engineered zinc-finger nucleases.


ABSTRACT: The frog Xenopus, an important research organism in cell and developmental biology, currently lacks tools for targeted mutagenesis. Here, we address this problem by genome editing with zinc-finger nucleases (ZFNs). ZFNs directed against an eGFP transgene in Xenopus tropicalis induced mutations consistent with nonhomologous end joining at the target site, resulting in mosaic loss of the fluorescence phenotype at high frequencies. ZFNs directed against the noggin gene produced tadpoles and adult animals carrying up to 47% disrupted alleles, and founder animals yielded progeny carrying insertions and deletions in the noggin gene with no indication of off-target effects. Furthermore, functional tests demonstrated an allelic series of activity between three germ-line mutant alleles. Because ZFNs can be designed against any locus, our data provide a generally applicable protocol for gene disruption in Xenopus.

SUBMITTER: Young JJ 

PROVIDER: S-EPMC3084115 | biostudies-literature | 2011 Apr

REPOSITORIES: biostudies-literature

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Efficient targeted gene disruption in the soma and germ line of the frog Xenopus tropicalis using engineered zinc-finger nucleases.

Young John J JJ   Cherone Jennifer M JM   Doyon Yannick Y   Ankoudinova Irina I   Faraji Farhoud M FM   Lee Andrew H AH   Ngo Catherine C   Guschin Dmitry Y DY   Paschon David E DE   Miller Jeffrey C JC   Zhang Lei L   Rebar Edward J EJ   Gregory Philip D PD   Urnov Fyodor D FD   Harland Richard M RM   Zeitler Bryan B  

Proceedings of the National Academy of Sciences of the United States of America 20110406 17


The frog Xenopus, an important research organism in cell and developmental biology, currently lacks tools for targeted mutagenesis. Here, we address this problem by genome editing with zinc-finger nucleases (ZFNs). ZFNs directed against an eGFP transgene in Xenopus tropicalis induced mutations consistent with nonhomologous end joining at the target site, resulting in mosaic loss of the fluorescence phenotype at high frequencies. ZFNs directed against the noggin gene produced tadpoles and adult a  ...[more]

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