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Gitools: analysis and visualisation of genomic data using interactive heat-maps.


ABSTRACT: Intuitive visualization of data and results is very important in genomics, especially when many conditions are to be analyzed and compared. Heat-maps have proven very useful for the representation of biological data. Here we present Gitools (http://www.gitools.org), an open-source tool to perform analyses and visualize data and results as interactive heat-maps. Gitools contains data import systems from several sources (i.e. IntOGen, Biomart, KEGG, Gene Ontology), which facilitate the integration of novel data with previous knowledge.

SUBMITTER: Perez-Llamas C 

PROVIDER: S-EPMC3094337 | biostudies-literature | 2011

REPOSITORIES: biostudies-literature

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Gitools: analysis and visualisation of genomic data using interactive heat-maps.

Perez-Llamas Christian C   Lopez-Bigas Nuria N  

PloS one 20110513 5


Intuitive visualization of data and results is very important in genomics, especially when many conditions are to be analyzed and compared. Heat-maps have proven very useful for the representation of biological data. Here we present Gitools (http://www.gitools.org), an open-source tool to perform analyses and visualize data and results as interactive heat-maps. Gitools contains data import systems from several sources (i.e. IntOGen, Biomart, KEGG, Gene Ontology), which facilitate the integration  ...[more]

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