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Rapid molecular strategy for orbivirus detection and characterization.


ABSTRACT: Orbiviruses infect a wide range of hosts, including humans. The ability to detect them has been hampered by their diversity. Here we present a simple consensus reverse transcription (RT)-PCR method targeting the polymerase gene for orbivirus recognition and characterization. Phylogenetic assignment is achieved by automated Web-based sequence analysis of amplification products.

SUBMITTER: Palacios G 

PROVIDER: S-EPMC3122741 | biostudies-literature | 2011 Jun

REPOSITORIES: biostudies-literature

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Rapid molecular strategy for orbivirus detection and characterization.

Palacios Gustavo G   Cowled Chris C   Bussetti Ana V AV   Savji Nazir N   Weir Richard R   Wick Ivan I   Travassos da Rosa Amelia A   Calisher Charles H CH   Tesh Robert B RB   Boyle David D   Lipkin W Ian WI  

Journal of clinical microbiology 20110330 6


Orbiviruses infect a wide range of hosts, including humans. The ability to detect them has been hampered by their diversity. Here we present a simple consensus reverse transcription (RT)-PCR method targeting the polymerase gene for orbivirus recognition and characterization. Phylogenetic assignment is achieved by automated Web-based sequence analysis of amplification products. ...[more]

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