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Complete genome sequence of the extremely halophilic Halanaerobium praevalens type strain (GSL).


ABSTRACT: Halanaerobium praevalens Zeikus et al. 1984 is the type species of the genus Halanaerobium, which in turn is the type genus of the family Halanaerobiaceae. The species is of interest because it is able to reduce a variety of nitro-substituted aromatic compounds at a high rate, and because of its ability to degrade organic pollutants. The strain is also of interest because it functions as a hydrolytic bacterium, fermenting complex organic matter and producing intermediary metabolites for other trophic groups such as sulfate-reducing and methanogenic bacteria. It is further reported as being involved in carbon removal in the Great Salt Lake, its source of isolation. This is the first completed genome sequence of a representative of the genus Halanaerobium and the second genome sequence from a type strain of the family Halanaerobiaceae. The 2,309,262 bp long genome with its 2,110 protein-coding and 70 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.

SUBMITTER: Ivanova N 

PROVIDER: S-EPMC3156398 | biostudies-literature | 2011 Jul

REPOSITORIES: biostudies-literature

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Complete genome sequence of the extremely halophilic Halanaerobium praevalens type strain (GSL).

Ivanova Natalia N   Sikorski Johannes J   Chertkov Olga O   Nolan Matt M   Lucas Susan S   Hammon Nancy N   Deshpande Shweta S   Cheng Jan-Fang JF   Tapia Roxanne R   Han Cliff C   Goodwin Lynne L   Pitluck Sam S   Huntemann Marcel M   Liolios Konstantinos K   Pagani Ioanna I   Mavromatis Konstantinos K   Ovchinikova Galina G   Pati Amrita A   Chen Amy A   Palaniappan Krishna K   Land Miriam M   Hauser Loren L   Brambilla Evelyne-Marie EM   Kannan K Palani KP   Rohde Manfred M   Tindall Brian J BJ   Göker Markus M   Detter John C JC   Woyke Tanja T   Bristow James J   Eisen Jonathan A JA   Markowitz Victor V   Hugenholtz Philip P   Kyrpides Nikos C NC   Klenk Hans-Peter HP   Lapidus Alla A  

Standards in genomic sciences 20110630 3


Halanaerobium praevalens Zeikus et al. 1984 is the type species of the genus Halanaerobium, which in turn is the type genus of the family Halanaerobiaceae. The species is of interest because it is able to reduce a variety of nitro-substituted aromatic compounds at a high rate, and because of its ability to degrade organic pollutants. The strain is also of interest because it functions as a hydrolytic bacterium, fermenting complex organic matter and producing intermediary metabolites for other tr  ...[more]

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