Unknown

Dataset Information

0

Conformational stability analyses of alpha subunit I domain of LFA-1 and Mac-1.


ABSTRACT: ?? integrin of lymphocyte function-associated antigen-1 (LFA-1) or macrophage-1 antigen (Mac-1) binds to their common ligand of intercellular adhesion molecule-1 (ICAM-1) and mediates leukocyte-endothelial cell (EC) adhesions in inflammation cascade. Although the two integrins are known to have distinct functions, the corresponding micro-structural bases remain unclear. Here (steered-)molecular dynamics simulations were employed to elucidate the conformational stability of ? subunit I domains of LFA-1 and Mac-1 in different affinity states and relevant I domain-ICAM-1 interaction features. Compared with low affinity (LA) Mac-1, the LA LFA-1 I domain was unstable in the presence or absence of ICAM-1 ligand, stemming from diverse orientations of its ??-helix with different motifs of zipper-like hydrophobic junction between ??- and ??-helices. Meanwhile, spontaneous transition of LFA-1 I domain from LA state to intermediate affinity (IA) state was first visualized. All the LA, IA, and high affinity (HA) states of LFA-1 I domain and HA Mac-1 I domain were able to bind to ICAM-1 ligand effectively, while LA Mac-1 I domain was unfavorable for binding ligand presumably due to the specific orientation of S144 side-chain that capped the MIDAS ion. These results furthered our understanding in correlating the structural bases with their functions of LFA-1 and Mac-1 integrins from the viewpoint of I domain conformational stability and of the characteristics of I domain-ICAM-1 interactions.

SUBMITTER: Mao D 

PROVIDER: S-EPMC3164198 | biostudies-literature | 2011

REPOSITORIES: biostudies-literature

altmetric image

Publications

Conformational stability analyses of alpha subunit I domain of LFA-1 and Mac-1.

Mao Debin D   Lü Shouqin S   Li Ning N   Zhang Yan Y   Long Mian M  

PloS one 20110831 8


β₂ integrin of lymphocyte function-associated antigen-1 (LFA-1) or macrophage-1 antigen (Mac-1) binds to their common ligand of intercellular adhesion molecule-1 (ICAM-1) and mediates leukocyte-endothelial cell (EC) adhesions in inflammation cascade. Although the two integrins are known to have distinct functions, the corresponding micro-structural bases remain unclear. Here (steered-)molecular dynamics simulations were employed to elucidate the conformational stability of α subunit I domains of  ...[more]

Similar Datasets

| S-EPMC6014170 | biostudies-literature
| S-EPMC7796194 | biostudies-literature
| S-EPMC10862807 | biostudies-literature
| S-EPMC4622212 | biostudies-literature
| S-EPMC2151656 | biostudies-literature
| S-EPMC419645 | biostudies-literature
| S-EPMC8374900 | biostudies-literature
| S-EPMC6456621 | biostudies-literature
| S-EPMC5437245 | biostudies-literature
| S-EPMC4932968 | biostudies-literature