Osmolyte effects on protein stability and solubility: a balancing act between backbone and side-chains.

ABSTRACT: In adaptation biology the discovery of intracellular osmolyte molecules that in some cases reach molar levels, raises questions of how they influence protein thermodynamics. We've addressed such questions using the premise that from atomic coordinates, the transfer free energy of a native protein (?G(tr,N)) can be predicted by summing measured water-to-osmolyte transfer free energies of the protein's solvent exposed side chain and backbone component parts. ?G(tr,D) is predicted using a self avoiding random coil model for the protein, and ?G(tr,D)-?G(tr,N), predicts the m-value, a quantity that measures the osmolyte effect on the N?D transition. Using literature and newly measured m-values we show 1:1 correspondence between predicted and measured m-values covering a range of 12 kcal/mol/M in protein stability for 46 proteins and 9 different osmolytes. Osmolytes present a range of side chain and backbone effects on N and D solubility and protein stability key to their biological roles.

SUBMITTER: Auton M 

PROVIDER: S-EPMC3166983 | biostudies-literature | 2011 Nov

REPOSITORIES: biostudies-literature