SiteComp: a server for ligand binding site analysis in protein structures.
Ontology highlight
ABSTRACT: Motivation
Computational characterization of ligand-binding sites in proteins provides preliminary information for functional annotation, protein design and ligand optimization. SiteComp implements binding site analysis for comparison of binding sites, evaluation of residue contribution to binding sites and identification of sub-sites with distinct molecular interaction properties.Availability and implementation
The SiteComp server and tutorials are freely available at http://sitecomp.sanchezlab.org.
SUBMITTER: Lin Y
PROVIDER: S-EPMC3324516 | biostudies-literature | 2012 Apr
REPOSITORIES: biostudies-literature
Publications
SiteComp: a server for ligand binding site analysis in protein structures.
Lin Yingjie Y Yoo Seungyeul S Sanchez Roberto R
Bioinformatics (Oxford, England) 20120224 8
<h4>Motivation</h4>Computational characterization of ligand-binding sites in proteins provides preliminary information for functional annotation, protein design and ligand optimization. SiteComp implements binding site analysis for comparison of binding sites, evaluation of residue contribution to binding sites and identification of sub-sites with distinct molecular interaction properties.<h4>Availability and implementation</h4>The SiteComp server and tutorials are freely available at http://sit ...[more]
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