Unknown

Dataset Information

0

Genome sequence of the homoacetogenic bacterium Holophaga foetida type strain (TMBS4(T)).

ABSTRACT: Holophaga foetida Liesack et al. 1995 is a member of the phylum Acidobacteria and is of interest for its ability to anaerobically degrade aromatic compounds and for its production of volatile sulfur compounds through a unique pathway. The genome of H. foetida strain TMBS4(T) is the first to be sequenced for a representative of the class Holophagae. Here we describe the features of this organism, together with the complete genome sequence (improved high quality draft), and annotation. The 4,127,237 bp long chromosome with its 3,615 protein-coding and 57 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.

SUBMITTER: Anderson I 

PROVIDER: S-EPMC3387795 | biostudies-literature | 2012 May

REPOSITORIES: biostudies-literature

Json Xml
altmetric image

Publications

Genome sequence of the homoacetogenic bacterium Holophaga foetida type strain (TMBS4(T)).

Anderson Iain I   Held Brittany B   Lapidus Alla A   Nolan Matt M   Lucas Susan S   Tice Hope H   Del Rio Tijana Glavina TG   Cheng Jan-Fang JF   Han Cliff C   Tapia Roxanne R   Goodwin Lynne A LA   Pitluck Sam S   Liolios Konstantinos K   Mavromatis Konstantinos K   Pagani Ioanna I   Ivanova Natalia N   Mikhailova Natalia N   Pati Amrita A   Chen Amy A   Palaniappan Krishna K   Land Miriam M   Brambilla Evelyne-Marie EM   Rohde Manfred M   Spring Stefan S   Göker Markus M   Detter John C JC   Woyke Tanja T   Bristow James J   Eisen Jonathan A JA   Markowitz Victor V   Hugenholtz Philip P   Klenk Hans-Peter HP   Kyrpides Nikos C NC  

Standards in genomic sciences 20120504 2

Holophaga foetida Liesack et al. 1995 is a member of the phylum Acidobacteria and is of interest for its ability to anaerobically degrade aromatic compounds and for its production of volatile sulfur compounds through a unique pathway. The genome of H. foetida strain TMBS4(T) is the first to be sequenced for a representative of the class Holophagae. Here we describe the features of this organism, together with the complete genome sequence (improved high quality draft), and annotation. The 4,127,2  ...[more]

Similar Datasets

Unknown Complete Genome Sequence of Potential Deoxynivalenol-Degrading Bacterium Youhaiella tibetensis Type Strain F4.
| S-EPMC6776779 | biostudies-literature
Unknown Genome sequence of the ocean sediment bacterium Saccharomonospora marina type strain (XMU15(T)).
| S-EPMC3387791 | biostudies-literature
Unknown Genome sequence of the soil bacterium Saccharomonospora azurea type strain (NA-128(T)).
| S-EPMC3387790 | biostudies-literature
Unknown Complete genome sequence of the gliding freshwater bacterium Fluviicola taffensis type strain (RW262).
| S-EPMC3236050 | biostudies-literature
Unknown Genome sequence of the soil bacterium Corynebacterium callunae type strain DSM 20147(T).
| S-EPMC4510995 | biostudies-literature
Unknown Genome sequence of the chromate-resistant bacterium Leucobacter salsicius type strain M1-8(T.).
| S-EPMC4148977 | biostudies-literature
Unknown Genome sequence of the orange-pigmented seawater bacterium Owenweeksia hongkongensis type strain (UST20020801(T)).
| S-EPMC3570807 | biostudies-literature
Unknown Complete genome sequence of the aquatic bacterium Runella slithyformis type strain (LSU 4(T)).
| S-EPMC3387789 | biostudies-literature
Unknown Genome sequence of the chemoheterotrophic soil bacterium Saccharomonospora cyanea type strain (NA-134(T)).
| S-EPMC3910552 | biostudies-literature
Unknown Genome sequence of a dissimilatory Fe(III)-reducing bacterium Geobacter soli type strain GSS01(T).
| S-EPMC4667449 | biostudies-literature