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Assessment of gene-by-sex interaction effect on bone mineral density.


ABSTRACT: Sexual dimorphism in various bone phenotypes, including bone mineral density (BMD), is widely observed; however, the extent to which genes explain these sex differences is unclear. To identify variants with different effects by sex, we examined gene-by-sex autosomal interactions genome-wide, and performed expression quantitative trait loci (eQTL) analysis and bioinformatics network analysis. We conducted an autosomal genome-wide meta-analysis of gene-by-sex interaction on lumbar spine (LS) and femoral neck (FN) BMD in 25,353 individuals from 8 cohorts. In a second stage, we followed up the 12 top single-nucleotide polymorphisms (SNPs; p?

SUBMITTER: Liu CT 

PROVIDER: S-EPMC3447125 | biostudies-literature | 2012 Oct

REPOSITORIES: biostudies-literature

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Assessment of gene-by-sex interaction effect on bone mineral density.

Liu Ching-Ti CT   Estrada Karol K   Yerges-Armstrong Laura M LM   Amin Najaf N   Evangelou Evangelos E   Li Guo G   Minster Ryan L RL   Carless Melanie A MA   Kammerer Candace M CM   Oei Ling L   Zhou Yanhua Y   Alonso Nerea N   Dailiana Zoe Z   Eriksson Joel J   García-Giralt Natalia N   Giroux Sylvie S   Husted Lise Bjerre LB   Khusainova Rita I RI   Koromila Theodora T   Kung Annie Waichee AW   Lewis Joshua R JR   Masi Laura L   Mencej-Bedrac Simona S   Nogues Xavier X   Nogues Xavier X   Patel Millan S MS   Prezelj Janez J   Richards J Brent JB   Sham Pak Chung PC   Spector Timothy T   Vandenput Liesbeth L   Xiao Su-Mei SM   Zheng Hou-Feng HF   Zhu Kun K   Balcells Susana S   Brandi Maria Luisa ML   Frost Morten M   Goltzman David D   González-Macías Jesús J   Karlsson Magnus M   Khusnutdinova Elza K EK   Kollia Panagoula P   Langdahl Bente Lomholt BL   Ljunggren Osten O   Lorentzon Mattias M   Marc Janja J   Mellström Dan D   Ohlsson Claes C   Olmos José M JM   Ralston Stuart H SH   Riancho José A JA   Rousseau François F   Urreizti Roser R   Van Hul Wim W   Zarrabeitia María T MT   Castano-Betancourt Martha M   Demissie Serkalem S   Grundberg Elin E   Herrera Lizbeth L   Kwan Tony T   Medina-Gómez Carolina C   Pastinen Tomi T   Sigurdsson Gunnar G   Thorleifsson Gudmar G   Vanmeurs Joyce Bj JB   Blangero John J   Hofman Albert A   Liu Yongmei Y   Mitchell Braxton D BD   O'Connell Jeffrey R JR   Oostra Ben A BA   Rotter Jerome I JI   Stefansson Kari K   Streeten Elizabeth A EA   Styrkarsdottir Unnur U   Thorsteinsdottir Unnur U   Tylavsky Frances A FA   Uitterlinden Andre A   Cauley Jane A JA   Harris Tamara B TB   Ioannidis John Pa JP   Psaty Bruce M BM   Robbins John A JA   Zillikens M Carola MC   Vanduijn Cornelia M CM   Prince Richard L RL   Karasik David D   Rivadeneira Fernando F   Kiel Douglas P DP   Cupples L Adrienne LA   Hsu Yi-Hsiang YH  

Journal of bone and mineral research : the official journal of the American Society for Bone and Mineral Research 20121001 10


Sexual dimorphism in various bone phenotypes, including bone mineral density (BMD), is widely observed; however, the extent to which genes explain these sex differences is unclear. To identify variants with different effects by sex, we examined gene-by-sex autosomal interactions genome-wide, and performed expression quantitative trait loci (eQTL) analysis and bioinformatics network analysis. We conducted an autosomal genome-wide meta-analysis of gene-by-sex interaction on lumbar spine (LS) and f  ...[more]

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