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Complete genome sequence of a new tobamovirus naturally infecting tomatoes in Mexico.

ABSTRACT: The complete genomic sequence of a new tobamovirus in tomatoes was determined through deep sequencing and assembly of small RNAs, then validated through Sanger sequencing. Based on the low sequence identity (?85%) to known viruses and a close phylogenetic relationship to tobamoviruses, it was identified as a new species.

SUBMITTER: Li R

PROVIDER: S-EPMC3790092 | biostudies-literature | 2013 Oct

REPOSITORIES: biostudies-literature

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Complete genome sequence of a new tobamovirus naturally infecting tomatoes in Mexico.

Li Rugang R Gao Shan S Fei Zhangjun Z Ling Kai-Shu KS

Genome announcements 20131003 5

The complete genomic sequence of a new tobamovirus in tomatoes was determined through deep sequencing and assembly of small RNAs, then validated through Sanger sequencing. Based on the low sequence identity (≤85%) to known viruses and a close phylogenetic relationship to tobamoviruses, it was identified as a new species. ...[more]

PMID: 24092788

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