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Genome sequence of the human malaria parasite Plasmodium falciparum.


ABSTRACT: The parasite Plasmodium falciparum is responsible for hundreds of millions of cases of malaria, and kills more than one million African children annually. Here we report an analysis of the genome sequence of P. falciparum clone 3D7. The 23-megabase nuclear genome consists of 14 chromosomes, encodes about 5,300 genes, and is the most (A + T)-rich genome sequenced to date. Genes involved in antigenic variation are concentrated in the subtelomeric regions of the chromosomes. Compared to the genomes of free-living eukaryotic microbes, the genome of this intracellular parasite encodes fewer enzymes and transporters, but a large proportion of genes are devoted to immune evasion and host-parasite interactions. Many nuclear-encoded proteins are targeted to the apicoplast, an organelle involved in fatty-acid and isoprenoid metabolism. The genome sequence provides the foundation for future studies of this organism, and is being exploited in the search for new drugs and vaccines to fight malaria.

SUBMITTER: Gardner MJ 

PROVIDER: S-EPMC3836256 | biostudies-literature | 2002 Oct

REPOSITORIES: biostudies-literature

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Genome sequence of the human malaria parasite Plasmodium falciparum.

Gardner Malcolm J MJ   Hall Neil N   Fung Eula E   White Owen O   Berriman Matthew M   Hyman Richard W RW   Carlton Jane M JM   Pain Arnab A   Nelson Karen E KE   Bowman Sharen S   Paulsen Ian T IT   James Keith K   Eisen Jonathan A JA   Rutherford Kim K   Salzberg Steven L SL   Craig Alister A   Kyes Sue S   Chan Man-Suen MS   Nene Vishvanath V   Shallom Shamira J SJ   Suh Bernard B   Peterson Jeremy J   Angiuoli Sam S   Pertea Mihaela M   Allen Jonathan J   Selengut Jeremy J   Haft Daniel D   Mather Michael W MW   Vaidya Akhil B AB   Martin David M A DM   Fairlamb Alan H AH   Fraunholz Martin J MJ   Roos David S DS   Ralph Stuart A SA   McFadden Geoffrey I GI   Cummings Leda M LM   Subramanian G Mani GM   Mungall Chris C   Venter J Craig JC   Carucci Daniel J DJ   Hoffman Stephen L SL   Newbold Chris C   Davis Ronald W RW   Fraser Claire M CM   Barrell Bart B  

Nature 20021001 6906


The parasite Plasmodium falciparum is responsible for hundreds of millions of cases of malaria, and kills more than one million African children annually. Here we report an analysis of the genome sequence of P. falciparum clone 3D7. The 23-megabase nuclear genome consists of 14 chromosomes, encodes about 5,300 genes, and is the most (A + T)-rich genome sequenced to date. Genes involved in antigenic variation are concentrated in the subtelomeric regions of the chromosomes. Compared to the genomes  ...[more]

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