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BioJS DAGViewer: A reusable JavaScript component for displaying directed graphs.

ABSTRACT:

Summary

The DAGViewer BioJS component is a reusable JavaScript component made available as part of the BioJS project and intended to be used to display graphs of structured data, with a particular emphasis on Directed Acyclic Graphs (DAGs). It enables users to embed representations of graphs of data, such as ontologies or phylogenetic trees, in hyper-text documents (HTML). This component is generic, since it is capable (given the appropriate configuration) of displaying any kind of data that is organised as a graph. The features of this component which are useful for examining and filtering large and complex graphs are described.

Availability

http://github.com/alexkalderimis/dag-viewer-biojs; http://github.com/biojs/biojs; http://dx.doi.org/10.5281/zenodo.8303.

SUBMITTER: Kalderimis A

PROVIDER: S-EPMC3945768 | biostudies-literature | 2014

REPOSITORIES: biostudies-literature

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BioJS DAGViewer: A reusable JavaScript component for displaying directed graphs.

Kalderimis Alexis A Stepan Radek R Sullivan Julie J Lyne Rachel R Lyne Michael M Micklem Gos G

F1000Research 20140213

<h4>Summary</h4>The DAGViewer BioJS component is a reusable JavaScript component made available as part of the BioJS project and intended to be used to display graphs of structured data, with a particular emphasis on Directed Acyclic Graphs (DAGs). It enables users to embed representations of graphs of data, such as ontologies or phylogenetic trees, in hyper-text documents (HTML). This component is generic, since it is capable (given the appropriate configuration) of displaying any kind of data ...[more]

PMID: 24627804

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