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FeatureViewer, a BioJS component for visualization of position-based annotations in protein sequences.

ABSTRACT:

Summary

FeatureViewer is a BioJS component that lays out, maps, orients, and renders position-based annotations for protein sequences. This component is highly flexible and customizable, allowing the presentation of annotations by rows, all centered, or distributed in non-overlapping tracks. It uses either lines or shapes for sites and rectangles for regions. The result is a powerful visualization tool that can be easily integrated into web applications as well as documents as it provides an export-to-image functionality.

Availability

https://github.com/biojs/biojs/blob/master/src/main/javascript/Biojs.FeatureViewer.js; http://dx.doi.org/10.5281/zenodo.7719.

SUBMITTER: Garcia L

PROVIDER: S-EPMC3983936 | biostudies-literature | 2014

REPOSITORIES: biostudies-literature

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FeatureViewer, a BioJS component for visualization of position-based annotations in protein sequences.

Garcia Leyla L Yachdav Guy G Martin Maria-Jesus MJ

F1000Research 20140213

<h4>Summary</h4>FeatureViewer is a BioJS component that lays out, maps, orients, and renders position-based annotations for protein sequences. This component is highly flexible and customizable, allowing the presentation of annotations by rows, all centered, or distributed in non-overlapping tracks. It uses either lines or shapes for sites and rectangles for regions. The result is a powerful visualization tool that can be easily integrated into web applications as well as documents as it provide ...[more]

PMID: 24741440

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