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The effects of polymorphisms on human gene targeting.


ABSTRACT: DNA mismatches that occur between vector homology arms and chromosomal target sequences reduce gene targeting frequencies in several species; however, this has not been reported in human cells. Here we demonstrate that even a single mismatched base pair can significantly decrease human gene targeting frequencies. In addition, we show that homology arm polymorphisms can be used to direct allele-specific targeting or to improve unfavorable vector designs that introduce deletions.

SUBMITTER: Deyle DR 

PROVIDER: S-EPMC3950700 | biostudies-literature | 2014 Mar

REPOSITORIES: biostudies-literature

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The effects of polymorphisms on human gene targeting.

Deyle David R DR   Li Li B LB   Ren Gaoying G   Russell David W DW  

Nucleic acids research 20131225 5


DNA mismatches that occur between vector homology arms and chromosomal target sequences reduce gene targeting frequencies in several species; however, this has not been reported in human cells. Here we demonstrate that even a single mismatched base pair can significantly decrease human gene targeting frequencies. In addition, we show that homology arm polymorphisms can be used to direct allele-specific targeting or to improve unfavorable vector designs that introduce deletions. ...[more]

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