Survey and analysis of simple sequence repeats (SSRs) present in the genomes of plant viroids.
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ABSTRACT:
SUBMITTER: Qin L
PROVIDER: S-EPMC3953718 | biostudies-literature | 2014
REPOSITORIES: biostudies-literature
Publications
Survey and analysis of simple sequence repeats (SSRs) present in the genomes of plant viroids.
Qin Lü L Zhang Zhixiang Z Zhao Xiangyan X Wu Xiaolong X Chen Yubao Y Tan Zhongyang Z Li Shifang S
FEBS open bio 20140207
Extensive simple sequence repeat (SSR) surveys have been performed for eukaryotic prokaryotic and viral genomes, but information regarding SSRs in viroids is limited. We undertook a survey to examine the presence of SSRs in viroid genomes. Our results show that the distribution of SSRs in viroids may influence secondary structure, and that SSRs could play a role in generating genetic diversity. We also discuss the potential evolutionary role of repeated sequences in the viroid genome. This is th ...[more]
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