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Insights into the glycosylase search for damage from single-molecule fluorescence microscopy.

ABSTRACT: The first step of base excision repair utilizes glycosylase enzymes to find damage within a genome. A persistent question in the field of DNA repair is how glycosylases interact with DNA to specifically find and excise target damaged bases with high efficiency and specificity. Ensemble studies have indicated that glycosylase enzymes rely upon both sliding and distributive modes of search, but ensemble methods are limited in their ability to directly observe these modes. Here we review insights into glycosylase scanning behavior gathered through single-molecule fluorescence studies of enzyme interactions with DNA and provide a context for these results in relation to ensemble experiments.

SUBMITTER: Lee AJ

PROVIDER: S-EPMC4112009 | biostudies-literature | 2014 Aug

REPOSITORIES: biostudies-literature

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Insights into the glycosylase search for damage from single-molecule fluorescence microscopy.

Lee Andrea J AJ Warshaw David M DM Wallace Susan S SS

DNA repair 20140220

The first step of base excision repair utilizes glycosylase enzymes to find damage within a genome. A persistent question in the field of DNA repair is how glycosylases interact with DNA to specifically find and excise target damaged bases with high efficiency and specificity. Ensemble studies have indicated that glycosylase enzymes rely upon both sliding and distributive modes of search, but ensemble methods are limited in their ability to directly observe these modes. Here we review insights i ...[more]

PMID: 24560296

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