Unknown

Dataset Information

0

A genome-wide association study identifies a susceptibility locus for refractive errors and myopia at 15q14.


ABSTRACT: Refractive errors are the most common ocular disorders worldwide and may lead to blindness. Although this trait is highly heritable, identification of susceptibility genes has been challenging. We conducted a genome-wide association study for refractive error in 5,328 individuals from a Dutch population-based study with replication in four independent cohorts (combined 10,280 individuals in the replication stage). We identified a significant association at chromosome 15q14 (rs634990, P = 2.21 × 10?¹?). The odds ratio of myopia compared to hyperopia for the minor allele (minor allele frequency = 0.47) was 1.41 (95% CI 1.16-1.70) for individuals heterozygous for the allele and 1.83 (95% CI 1.42-2.36) for individuals homozygous for the allele. The associated locus is near two genes that are expressed in the retina, GJD2 and ACTC1, and appears to harbor regulatory elements which may influence transcription of these genes. Our data suggest that common variants at 15q14 influence susceptibility for refractive errors in the general population.

SUBMITTER: Solouki AM 

PROVIDER: S-EPMC4115149 | biostudies-literature | 2010 Oct

REPOSITORIES: biostudies-literature

altmetric image

Publications

A genome-wide association study identifies a susceptibility locus for refractive errors and myopia at 15q14.

Solouki Abbas M AM   Verhoeven Virginie J M VJ   van Duijn Cornelia M CM   Verkerk Annemieke J M H AJ   Ikram M Kamran MK   Hysi Pirro G PG   Despriet Dominiek D G DD   van Koolwijk Leonieke M LM   Ho Lintje L   Ramdas Wishal D WD   Czudowska Monika M   Kuijpers Robert W A M RW   Amin Najaf N   Struchalin Maksim M   Aulchenko Yurii S YS   van Rij Gabriel G   Riemslag Frans C C FC   Young Terri L TL   Mackey David A DA   Spector Timothy D TD   Gorgels Theo G M F TG   Willemse-Assink Jacqueline J M JJ   Isaacs Aaron A   Kramer Rogier R   Swagemakers Sigrid M A SM   Bergen Arthur A B AA   van Oosterhout Andy A L J AA   Oostra Ben A BA   Rivadeneira Fernando F   Uitterlinden André G AG   Hofman Albert A   de Jong Paulus T V M PT   Hammond Christopher J CJ   Vingerling Johannes R JR   Klaver Caroline C W CC  

Nature genetics 20100912 10


Refractive errors are the most common ocular disorders worldwide and may lead to blindness. Although this trait is highly heritable, identification of susceptibility genes has been challenging. We conducted a genome-wide association study for refractive error in 5,328 individuals from a Dutch population-based study with replication in four independent cohorts (combined 10,280 individuals in the replication stage). We identified a significant association at chromosome 15q14 (rs634990, P = 2.21 ×  ...[more]

Similar Datasets

| S-EPMC4115148 | biostudies-literature
| S-EPMC3136364 | biostudies-literature
| S-EPMC3227560 | biostudies-literature
| S-EPMC3983781 | biostudies-literature
| S-EPMC3372671 | biostudies-literature
| S-EPMC2650328 | biostudies-literature
| S-EPMC2893814 | biostudies-literature
| S-EPMC2754845 | biostudies-literature
| S-EPMC3354739 | biostudies-literature
| S-EPMC4975513 | biostudies-literature