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No evidence for genome-wide interactions on plasma fibrinogen by smoking, alcohol consumption and body mass index: results from meta-analyses of 80,607 subjects.


ABSTRACT: Plasma fibrinogen is an acute phase protein playing an important role in the blood coagulation cascade having strong associations with smoking, alcohol consumption and body mass index (BMI). Genome-wide association studies (GWAS) have identified a variety of gene regions associated with elevated plasma fibrinogen concentrations. However, little is yet known about how associations between environmental factors and fibrinogen might be modified by genetic variation. Therefore, we conducted large-scale meta-analyses of genome-wide interaction studies to identify possible interactions of genetic variants and smoking status, alcohol consumption or BMI on fibrinogen concentration. The present study included 80,607 subjects of European ancestry from 22 studies. Genome-wide interaction analyses were performed separately in each study for about 2.6 million single nucleotide polymorphisms (SNPs) across the 22 autosomal chromosomes. For each SNP and risk factor, we performed a linear regression under an additive genetic model including an interaction term between SNP and risk factor. Interaction estimates were meta-analysed using a fixed-effects model. No genome-wide significant interaction with smoking status, alcohol consumption or BMI was observed in the meta-analyses. The most suggestive interaction was found for smoking and rs10519203, located in the LOC123688 region on chromosome 15, with a p value of 6.2 × 10(-8). This large genome-wide interaction study including 80,607 participants found no strong evidence of interaction between genetic variants and smoking status, alcohol consumption or BMI on fibrinogen concentrations. Further studies are needed to yield deeper insight in the interplay between environmental factors and gene variants on the regulation of fibrinogen concentrations.

SUBMITTER: Baumert J 

PROVIDER: S-EPMC4281156 | biostudies-literature | 2014

REPOSITORIES: biostudies-literature

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No evidence for genome-wide interactions on plasma fibrinogen by smoking, alcohol consumption and body mass index: results from meta-analyses of 80,607 subjects.

Baumert Jens J   Huang Jie J   McKnight Barbara B   Sabater-Lleal Maria M   Steri Maristella M   Chu Audrey Y AY   Trompet Stella S   Lopez Lorna M LM   Fornage Myriam M   Teumer Alexander A   Tang Weihong W   Rudnicka Alicja R AR   Mälarstig Anders A   Hottenga Jouke-Jan JJ   Kavousi Maryam M   Lahti Jari J   Tanaka Toshiko T   Hayward Caroline C   Huffman Jennifer E JE   Morange Pierre-Emmanuel PE   Rose Lynda M LM   Basu Saonli S   Rumley Ann A   Stott David J DJ   Buckley Brendan M BM   de Craen Anton J M AJ   Sanna Serena S   Masala Marco M   Biffar Reiner R   Homuth Georg G   Silveira Angela A   Sennblad Bengt B   Goel Anuj A   Watkins Hugh H   Müller-Nurasyid Martina M   Rückerl Regina R   Taylor Kent K   Chen Ming-Huei MH   de Geus Eco J C EJ   Hofman Albert A   Witteman Jacqueline C M JC   de Maat Moniek P M MP   Palotie Aarno A   Davies Gail G   Siscovick David S DS   Kolcic Ivana I   Wild Sarah H SH   Song Jaejoon J   McArdle Wendy L WL   Ford Ian I   Sattar Naveed N   Schlessinger David D   Grotevendt Anne A   Franzosi Maria Grazia MG   Illig Thomas T   Waldenberger Melanie M   Lumley Thomas T   Tofler Geoffrey H GH   Willemsen Gonneke G   Uitterlinden André G AG   Rivadeneira Fernando F   Räikkönen Katri K   Chasman Daniel I DI   Folsom Aaron R AR   Lowe Gordon D GD   Westendorp Rudi G J RG   Slagboom P Eline PE   Cucca Francesco F   Wallaschofski Henri H   Strawbridge Rona J RJ   Seedorf Udo U   Koenig Wolfgang W   Bis Joshua C JC   Mukamal Kenneth J KJ   van Dongen Jenny J   Widen Elisabeth E   Franco Oscar H OH   Starr John M JM   Liu Kiang K   Ferrucci Luigi L   Polasek Ozren O   Wilson James F JF   Oudot-Mellakh Tiphaine T   Campbell Harry H   Navarro Pau P   Bandinelli Stefania S   Eriksson Johan J   Boomsma Dorret I DI   Dehghan Abbas A   Clarke Robert R   Hamsten Anders A   Boerwinkle Eric E   Jukema J Wouter JW   Naitza Silvia S   Ridker Paul M PM   Völzke Henry H   Deary Ian J IJ   Reiner Alexander P AP   Trégouët David-Alexandre DA   O'Donnell Christopher J CJ   Strachan David P DP   Peters Annette A   Smith Nicholas L NL  

PloS one 20141231 12


Plasma fibrinogen is an acute phase protein playing an important role in the blood coagulation cascade having strong associations with smoking, alcohol consumption and body mass index (BMI). Genome-wide association studies (GWAS) have identified a variety of gene regions associated with elevated plasma fibrinogen concentrations. However, little is yet known about how associations between environmental factors and fibrinogen might be modified by genetic variation. Therefore, we conducted large-sc  ...[more]

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