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16SrRNA sequencing of Dye decolorizing bacteria isolated from Soil.

ABSTRACT: Dye?s residues in textile effluents are hazardous for humans and animals health. Such pollutants can be degraded into non-harmful molecules using biological approaches that are considered cheaper and ecologically safer. Isolated 15 bacterial cultures from soil that could be used in biological system were showed decolorization capacity for Acid Green dye (33.9% to 94.0%) using thin layer chromatography and broth culture method. The most promising cultures (AMC3) to decolorize Acid green Dye (94.6%) was re-coded as NSDSUAM for submitting at IMTECH, Chandigarh for sequencing. The 16SrRNA sequencing suggested that it can be a variant of Pseudomonas geniculata (99.85% identical similarity) with difference of 2 base pairs to reference strain Pseudomonas geniculata ATCC 19374(T). Thus present study proposed dye decolorizing efficiency of the isolated strain of Pseudomonas geniculata that was previously unnoticed. The sequence is deposited in NCBI GenBank with the accession number KP238100.

SUBMITTER: Kumar A

PROVIDER: S-EPMC4349931 | biostudies-literature | 2015

REPOSITORIES: biostudies-literature

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16SrRNA sequencing of Dye decolorizing bacteria isolated from Soil.

Kumar Avnish A Asthana Monika M Gupta Poonam P Yadav Shweta S Sharma Deepti D Singh Km Neeraj KN Kumar Sunil S

Bioinformation 20150130 1

Dye׳s residues in textile effluents are hazardous for humans and animals health. Such pollutants can be degraded into non-harmful molecules using biological approaches that are considered cheaper and ecologically safer. Isolated 15 bacterial cultures from soil that could be used in biological system were showed decolorization capacity for Acid Green dye (33.9% to 94.0%) using thin layer chromatography and broth culture method. The most promising cultures (AMC3) to decolorize Acid green Dye (94.6 ...[more]

PMID: 25780272

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Soil 16SrRNA

Project description:Soil 16SrRNA Raw sequence reads

| PRJNA680200 | ENA

Fungal dye-decolorizing peroxidase diversity: roles in either intra- or extracellular processes.

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