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First complete genome sequence of an emerging cucumber green mottle mosaic virus isolate in north america.

ABSTRACT: The complete genome sequence (6,423 nucleotides [nt]) of an emerging cucumber green mottle mosaic virus (CGMMV) isolate on cucumber in North America was determined through deep sequencing of small (sRNA) and rapid amplification of cDNA ends. The virus shares 99% nucleotide sequence identity with the Asian genotype but only 90% with the European genotype.

SUBMITTER: Li R

PROVIDER: S-EPMC4424317 | biostudies-literature | 2015 May

REPOSITORIES: biostudies-literature

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First complete genome sequence of an emerging cucumber green mottle mosaic virus isolate in north america.

Li Rugang R Zheng Yi Y Fei Zhangjun Z Ling Kai-Shu KS

Genome announcements 20150507 3

The complete genome sequence (6,423 nucleotides [nt]) of an emerging cucumber green mottle mosaic virus (CGMMV) isolate on cucumber in North America was determined through deep sequencing of small (sRNA) and rapid amplification of cDNA ends. The virus shares 99% nucleotide sequence identity with the Asian genotype but only 90% with the European genotype. ...[more]

PMID: 25953166

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