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Beyond carbon and nitrogen: guidelines for estimating three-dimensional isotopic niche space.

ABSTRACT: Isotopic niche has typically been characterized through carbon and nitrogen ratios and most modeling approaches are limited to two dimensions. Yet, other stable isotopes can provide additional power to resolve questions associated with foraging, migration, dispersal and variations in resource use. The ellipse niche model was recently generalized to n-dimensions. We present an analogous methodology which incorporates variation across three stable dimensions to estimate the significant features of a population's isotopic niche space including: 1) niche volume (referred to as standard ellipsoid volume, SEV), 2) relative centroid location (CL), 3) shape and 4) area of overlap between multiple ellipsoids and 5) distance between two CLs. We conducted a simulation study showing the accuracy and precision of three dimensional niche models across a range of values. Importantly, the model correctly identifies differences in SEV and CL among populations, even with small sample sizes and in cases where the absolute values cannot precisely be recovered. We use these results to provide guidelines for sample size in conducting multivariate isotopic niche modeling. We demonstrate the utility of our approach with a case study of three bottlenose dolphin populations which appear to possess largely overlapping niches when analyzed with only carbon and nitrogen isotopes. Upon inclusion of sulfur, we see that the three dolphin ecotypes are in fact segregated on the basis of salinity and find the stable isotope niche of inshore bottlenose dolphins significantly larger than coastal and offshore populations.

SUBMITTER: Rossman S

PROVIDER: S-EPMC4834325 | biostudies-literature | 2016 Apr

REPOSITORIES: biostudies-literature

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Beyond carbon and nitrogen: guidelines for estimating three-dimensional isotopic niche space.

Rossman Sam S Ostrom Peggy H PH Gordon Forrest F Zipkin Elise F EF

Ecology and evolution 20160309 8

Isotopic niche has typically been characterized through carbon and nitrogen ratios and most modeling approaches are limited to two dimensions. Yet, other stable isotopes can provide additional power to resolve questions associated with foraging, migration, dispersal and variations in resource use. The ellipse niche model was recently generalized to n-dimensions. We present an analogous methodology which incorporates variation across three stable dimensions to estimate the significant features of ...[more]

PMID: 27110351

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Project description:Nutrient elements are important for plant growth. Element stoichiometry considers the balance between different nutrients and how this balance is affected by the environment. So far, focus of plant stoichiometry has mainly been on the three elements carbon (C), nitrogen (N), and phosphorus (P), but many additional elements are essential for proper plant growth. Our overall aim is to test the scaling relations of various additional elements (K, Ca, Mg, S, Cu, Zn, Fe, Mn), by using ten data sets from a range of plant functional types and environmental conditions. To simultaneously handle more than one element, we define a stoichiometric niche volume as the volume of an abstract multidimensional shape in n dimensions, with the n sides of this shape defined by the plant properties in question, here their element concentrations. Thus, a stoichiometric niche volume is here defined as the product of element concentrations. The volumes of N and P (VNP ) are used as the basis, and we investigate how the volume of other elements (VOth ) scales with respect to VNP¸ with the intention to explore if the concentrations of other elements increase faster (scaling exponent > 1) or slower (<1) than the concentrations of N and P. For example, scaling exponents >1 suggest that favorable conditions for plant growth, i.e., environments rich in N and P, may require proportionally higher uptake of other essential elements than poor conditions. We show that the scaling exponent is rather insensitive to environmental conditions or plant species, and ranges from 0.900 to 2.479 (average 1.58) in nine out of ten data sets. For single elements, Mg has the smallest scaling exponent (0.031) and Mn the largest (2.147). Comparison between laboratory determined stoichiometric relations and field observations suggest that element uptake in field conditions often exceeds the minimal physiological requirements. The results provide evidence for the view that the scaling relations previously reported for N and P can be extended to other elements; and that N and P are the driving elements in plant stoichiometric relations. The stoichiometric niche volumes defined here could be used to predict plant performances in different environments.

Project description:BackgroundBrazil is a low- to medium-income country and has the second largest pet food market in the world with 8% of world pet food consumption. The lowest-income social class spends around 17% of their domestic budget on pet food and other items related to pets. Consumers are frequently misled by advertising as there is no precise information about the main sources of protein, carbohydrates and fat in the labels, and the Brazilian pet food industry can legally claim that their products contain certain items like salmon or beef even if they use just a flavoring compound.MethodsThe stable isotope methodology compares the stable isotope ratios of carbon (13C/12C) and nitrogen (15N/14N) between source and product. The 13C/12C ratio of a specific product (e.g., dog food) reveals the proportions of C4 (maize) and C3 (soybean, rice and wheat) plants in that product and the 15N/14N ratio reveals the proportion of the compounds derived from animals. With this isotopic data, we used MixSIAR, a Bayesian stable isotope-mixing model, to estimate the proportion of maize, grains, poultry and beef in dog food.ResultsThe δ13C values of dry dog food ranged from -24.2‰ to -12.8‰, with an average (± standard-deviation) of -17.1‰ ± 2.8‰. The δ13C values of wet pet food ranged from -25.4‰ to -16.9‰, with an average (± standard-deviation) of -21.2‰ ± 2.4‰, which was significantly lower (p < 0.01). The δ15N values of the dry and wet food ranged from 1.7‰ to 4.2‰, and from 0.5‰ to 5.5‰, respectively. The average δ15N values of dry food (2.9‰ ± 0.5‰) was not higher than the wet food (2.6‰ ± 1.3‰) (p > 0.01). The output of the MixSIAR showed a low proportion of bovine products in dry dog food samples. On the other hand, poultry was obviously the dominant ingredient present in most of the samples. Maize was the second dominant ingredient. Wet and dry dog food showed similar isotopic analysis results. The only difference was a lower proportion of maize and higher proportion of grains in wet dog food.DiscussionThe main finding is that dog food in Brazil is mostly made of approximately 60% (ranging from 32% to 86%) animal-based and 40% (ranging from 14% to 67%) plant-based products. Poultry and maize are the main ingredients. Poultry is added as a by-product or meal, which avoids competition between dogs and humans for meat products, while they can compete for maize. On the other hand, a large proportion of plant-based products in dog food decreases the energy and environmental footprint, since plant-based food products tend to be less harmful compared to animal-based products. Labels can mislead consumers by showing pictures of items that are not necessarily part of the product composition and by not showing the detailed information on the proportion of each ingredient. This information would allow customers to make their own choices considering their pet's nutrition, the competition between animals and humans for resources and environmental sustainability.

Project description:RationaleCarbonised plant remains are analysed for reconstruction of past climates and agricultural regimes. Several recent studies have used C4 plants to address related questions, and correlations between modern C4 plant δ13 C values and rainfall have been found. The millets were important food crops in prehistoric Eurasia, yet little is known about causes of isotopic variation within millet species. Previous research has shown there to be significant isotopic variation between millet accessions. Here we compare isotope ratios from plants grown under different watering regimes. This allows for a consideration of whether or not Setaria italica is a good proxy for environmental reconstruction.MethodsWe compare stable isotope ratios of Setaria italica plants grown in a controlled environment chamber with different watering regimes. We compare the carbon isotope ratios of leaves and grains, and the nitrogen isotope ratios of grains, from 12 accessions of Setaria italica.ResultsWe find significant isotopic variability between watering regimes. Carbon isotope ratios are positively correlated with water availability, and on average vary by 1.9‰ and 1.7‰ for leaves and grains, respectively. Grain nitrogen isotope ratios also vary with watering regime; however, the highest isotope ratios are found with the 130-mL watering regime.ConclusionsThe carbon isotope ratios of Setaria italica are strongly correlated with water availability. However, the correlation is the opposite to that seen in studies of C3 plants. The difference in isotopic ratio due to watering regime is comparable with that seen between different accessions; thus distinguishing between changing varieties of Setaria italica and changing climate is problematic. In terms of grain nitrogen isotope ratios, the highest δ15 N values were not associated with the lowest watering regime. Again, δ15 N variation is comparable with that which would be expected from an aridity effect or a manuring effect, and thus distinguishing between these factors is probably problematic.

Dataset Information

Beyond carbon and nitrogen: guidelines for estimating three-dimensional isotopic niche space.

Publications

Beyond carbon and nitrogen: guidelines for estimating three-dimensional isotopic niche space.

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