Browse
Submit Data
Databases
API
Help

Dataset Information

19 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

First Complete Genome Sequence of a Watermelon Mosaic Virus Isolated from Watermelon in the United States.

ABSTRACT: Watermelon mosaic virus was first reported in 1965 from the Rio Grande Valley, TX. We report here the first complete genome sequence of a watermelon mosaic virus isolate from watermelon collected from the Rio Grande Valley of Texas.

SUBMITTER: Rajbanshi N

PROVIDER: S-EPMC4841139 | biostudies-literature | 2016 Apr

REPOSITORIES: biostudies-literature

ACCESS DATA

Json Xml

Publications

First Complete Genome Sequence of a Watermelon Mosaic Virus Isolated from Watermelon in the United States.

Rajbanshi Naveen N Ali Akhtar A

Genome announcements 20160421 2

Watermelon mosaic virus was first reported in 1965 from the Rio Grande Valley, TX. We report here the first complete genome sequence of a watermelon mosaic virus isolate from watermelon collected from the Rio Grande Valley of Texas. ...[more]

PMID: 27103724

Similar Datasets

Complete Genome Sequence of Tomato Mosaic Virus Isolated from Jasmine in the United States.

Project description:Tomato mosaic virus was reported from jasmine in Florida. We present the first complete genome sequence of a tomato mosaic virus isolate from this woody perennial plant in the United States.

| S-EPMC4498111 | biostudies-literature

First Complete Genome Sequence of Cucumber green mottle mosaic virus Isolated from Australia.

Project description:We present here the first complete genome sequence of the tobamovirus Cucumber green mottle mosaic virus (CGMMV) from Australia, obtained from an infected cucumber plant. Compared with other CGMMV genomes, its closest nucleotide identities were 99.6% to KP772568, 99.3% to KF155229, and 99.1% to DQ767631 from Canada, Israel, and India, respectively.

| S-EPMC5364214 | biostudies-literature

Complete genome sequence of a tomato mottle mosaic virus isolate from the United States.

Project description:Tomato mottle mosaic virus was recently reported from the United States following its original description from Mexico as a novel Tobamovirus species. We present the first complete genome sequence of a tomato mottle mosaic virus isolate from the United States.

| S-EPMC4384480 | biostudies-literature

First Complete Genome Sequence of Papaya ringspot virus-W Isolated from a Gourd in the United States.

Project description:In the United States, the Papaya ringspot virus was first reported from papaya in Florida in 1949. Here, we determined the first complete genome sequence (10,302 nucleotides) of a Papaya ringspot virus-W isolate, which was collected from a commercial field of gourd in Tulsa, OK.

| S-EPMC5256226 | biostudies-literature

Complete genome sequence of a rat hepatitis e virus strain isolated in the United States.

Project description:Hepatitis E virus is a common cause of acute hepatitis in humans. Related viruses have been isolated from multiple animal species, including rats, but their impact on human health is unclear. We present the first full-length genome sequence of a rat hepatitis E virus strain isolated in the United States (LA-B350).

| S-EPMC4223451 | biostudies-literature

Complete Genome Sequence of a Tomato Brown Rugose Fruit Virus Isolated in the United States.

Project description:The complete genome sequence of a U.S. isolate of a Tomato brown rugose fruit virus (ToBRFV) (CA18-01) was obtained through Illumina and MinION sequencing. The U.S. ToBRFV isolate shared a high nucleic acid sequence identity (>99%) with known ToBRFV isolates. Phylogenetic analysis revealed a tight cluster for ToBRFV isolates throughout the world, suggesting a short evolutionary history.

| S-EPMC7365798 | biostudies-literature

Complete Genome Sequence of Iris Severe Mosaic Virus Isolated in Japan.

Project description:The complete genome sequence of an iris severe mosaic virus isolate (ISMV) from Iris tectorum in Japan was determined for the first time. According to sequence identity analyses, our specimen is closely related to isolates reported from China.

| S-EPMC6460025 | biostudies-literature

First Complete Genome Sequence of Cucurbit Aphid-Borne Yellows Virus from Pumpkin in the United States.

Project description:Cucurbit aphid-borne yellows virus (CABYV) was first described in France in 1992 and since then has been reported in various parts of the world, including the United States. Here, we present the first complete genome sequence of a CABYV isolate (BL4) that was collected from pumpkin during the 2017 growing season in Oklahoma.

| S-EPMC6368653 | biostudies-literature

First Complete Genome Sequence of Pepper mild mottle virus from Chili Pepper in the United States.

Project description:Pepper mild mottle virus (PMMoV) was first reported as a latent strain in the United States and then later reported in other countries around the world. Here, we report the first complete genome sequence of a PMMoV isolate (BL14) that was collected from chili pepper during the 2014 growing season in Oklahoma.

| S-EPMC5940964 | biostudies-literature

Complete Genome Sequence of Alternanthera mosaic virus, Isolated from Achyranthes bidentata in Asia.

Project description:Alternanthera mosaic virus (AltMV) infecting Achyranthes bidentata was first detected in Asia, and the complete genome sequence (6,604 nucleotides) was determined. Sequence identity analysis and phylogenetic analysis confirmed that this isolate is the most phylogenetically distant AltMV isolate worldwide.

| S-EPMC4796113 | biostudies-literature

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data