RCGH: a comprehensive array-based genomic profile platform for precision medicine.
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ABSTRACT: Unlabelled
We present rCGH, a comprehensive array-based comparative genomic hybridization analysis workflow, integrating computational improvements and functionalities specifically designed for precision medicine. rCGH supports the major microarray platforms, ensures a full traceability and facilitates profiles interpretation and decision-making through sharable interactive visualizations.Availability and implementation
The rCGH R package is available on bioconductor (under Artistic-2.0). The aCGH-viewer is available at https://fredcommo.shinyapps.io/aCGH_viewer, and the application implementation is freely available for installation at https://github.com/fredcommo/aCGH_viewerContact
frederic.commo@gustaveroussy.frSupplementary information
Supplementary data are available at Bioinformatics online.
SUBMITTER: Commo F
PROVIDER: S-EPMC4848396 | biostudies-literature | 2016 May
REPOSITORIES: biostudies-literature
Publications
rCGH: a comprehensive array-based genomic profile platform for precision medicine.
Commo Frederic F Guinney Justin J Ferté Charles C Bot Brian B Lefebvre Celine C Soria Jean-Charles JC André Fabrice F
Bioinformatics (Oxford, England) 20151226 9
<h4>Unlabelled</h4>We present rCGH, a comprehensive array-based comparative genomic hybridization analysis workflow, integrating computational improvements and functionalities specifically designed for precision medicine. rCGH supports the major microarray platforms, ensures a full traceability and facilitates profiles interpretation and decision-making through sharable interactive visualizations.<h4>Availability and implementation</h4>The rCGH R package is available on bioconductor (under Artis ...[more]
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