Dataset Information

Potential sources of microbial colonizers in an initial soil ecosystem after retreat of an alpine glacier.

ABSTRACT: Rapid disintegration of alpine glaciers has led to the formation of new terrain consisting of mineral debris colonized by microorganisms. Despite the importance of microbial pioneers in triggering the formation of terrestrial ecosystems, their sources (endogenous versus exogenous) and identities remain elusive. We used 454-pyrosequencing to characterize the bacterial and fungal communities in endogenous glacier habitats (ice, sub-, supraglacial sediments and glacier stream leaving the glacier forefront) and in atmospheric deposition (snow, rain and aeolian dust). We compared these microbial communities with those occurring in recently deglaciated barren soils before and after snow melt (snow-covered soil and barren soil). Atmospheric bacteria and fungi were dominated by plant-epiphytic organisms and differed from endogenous glacier habitats and soils indicating that atmospheric input of microorganisms is not a major source of microbial pioneers in newly formed soils. We found, however, that bacterial communities in newly exposed soils resembled those of endogenous habitats, which suggests that bacterial pioneers originating from sub- and supraglacial sediments contributed to the colonization of newly exposed soils. Conversely, fungal communities differed between habitats suggesting a lower dispersal capability than bacteria. Yeasts putatively adapted to cold habitats characteristic of snow and supraglacial sediments were similar, despite the fact that these habitats were not spatially connected. These findings suggest that environmental filtering selects particular fungi in cold habitats. Atmospheric deposition provided important sources of dissolved organic C, nitrate and ammonium. Overall, microbial colonizers triggering soil development in alpine environments mainly originate from endogenous glacier habitats, whereas atmospheric deposition contributes to the establishment of microbial communities by providing sources of C and N.

SUBMITTER: Rime T

PROVIDER: S-EPMC4918445 | biostudies-literature | 2016 Jul

REPOSITORIES: biostudies-literature

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Potential sources of microbial colonizers in an initial soil ecosystem after retreat of an alpine glacier.

Rime Thomas T Hartmann Martin M Frey Beat B

The ISME journal 20160115 7

Rapid disintegration of alpine glaciers has led to the formation of new terrain consisting of mineral debris colonized by microorganisms. Despite the importance of microbial pioneers in triggering the formation of terrestrial ecosystems, their sources (endogenous versus exogenous) and identities remain elusive. We used 454-pyrosequencing to characterize the bacterial and fungal communities in endogenous glacier habitats (ice, sub-, supraglacial sediments and glacier stream leaving the glacier fo ...[more]

PMID: 26771926

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Project description:The western Antarctic Peninsula is experiencing strong environmental changes as a consequence of ongoing regional warming. Glaciers in the area are retreating rapidly and increased sediment-laden meltwater runoff threatens the benthic biodiversity at shallow depths. We identified three sites with a distinct glacier-retreat related history and different levels of glacial influence in the inner part of Potter Cove (King George Island, South Shetland Islands), a fjord-like embayment impacted since the 1950s by a tidewater glacier retreat. We compared the soft sediment meio- and macrofauna isotopic niche widths (δ13C and δ15N stable isotope analysis) at the three sites to investigate possible glacier retreat-related influences on benthic trophic interactions. The isotopic niches were locally shaped by the different degrees of glacier retreat-related disturbance within the Cove. Wider isotopic niche widths were found at the site that has become ice-free most recently, and narrower niches at the older ice-free sites. At an intermediate state of glacier retreat-related disturbance (e.g. via ice-growler scouring) species with different strategies could settle. The site at the earliest stage of post-retreat development was characterized by an assemblage with lower trophic redundancy. Generally, the isotopic niche widths increased with increasing size spectra of organisms within the community, excepting the youngest assemblage, where the pioneer colonizer meiofauna size class displayed the highest isotopic niche width. Meiofauna at all sites generally occupied positions in the isotopic space that suggested a detrital-pool food source and/or the presence of predatory taxa. In general ice scour and glacial impact appeared to play a two-fold role within the Cove: i) either stimulating trophic diversity by allowing continuous re-colonization of meiofaunal species or, ii) over time driving the benthic assemblages into a more compact trophic structure with increased connectedness and resource recycling.

Project description:To assess the spatial-temporal dynamics of primary succession following deglaciation in soil-dwelling lichen communities.European Alps (Austria, Switzerland and Italy).Five glacier forelands subjected to relevant glacier retreat during the last century were investigated. In each glacier foreland, three successional stages were selected at increasing distance from the glacier, corresponding to a gradient of time since deglaciation between 25 and 160 years. In each successional stage, soil-dwelling lichens were surveyed within five 1 × 1 m plots. In addition to a classical ecological framework, based on species richness and composition, we applied a functional approach to better elucidate community assembly mechanisms.A positive relationship was found between species richness and time since deglaciation indicating that richer lichen communities can be found at increasing terrain ageing. This pattern was associated with compositional shifts, suggesting that different community assemblages can be found along the successional stages. The analysis of ?-diversity revealed a significant nested pattern of species assemblages along the gradient (i.e. earlier successional stages hosted a subset of the species already established in older successional stages), while the turnover component was less relevant. Considering functional groups, we found contrasting patterns in relation to time since deglaciation: the incidence of species with a cyanobacterial photobiont and those reproducing by spores decreased, while that of species reproducing by vegetative propagules increased.This study reveals that community assembly patterns of soil-dwelling lichens in alpine glacier forelands are ruled by mechanisms of directional species accumulation and trait selection that involve a trade-off between different functional strategies. Functional traits that reflect the dispersal and adaptation capability of the species underpin the colonization success of soil-dwelling lichens in glacier forelands.

Project description:BackgroundThe glaciers in the Alps, as in other high mountain ranges and boreal zones, are generally retreating and leaving a wide surface of bare ground free from ice cover. This early stage soil is then colonized by microbes and vegetation in a process of primary succession. It is rarely experimentally examined whether this colonization process is linear or not at the ecosystem scale. Thus, to improve our understanding of the variables involved in the carbon accumulation in the different stages of primary succession, we conducted this research in three transects on the Matsch glacier forefield (Alps, N Italy) at an altitude between 2,350 and 2,800 m a.s.l.MethodsIn three field campaigns (July, August and September 2014) a closed transparent chamber was used to quantify the net ecosystem exchange (NEE) between the natural vegetation and the atmosphere. On the five plots established in each of the three transects, shading nets were used to determine ecosystem response function to variable light conditions. Ecosystem respiration (Reco) and gross ecosystem exchange (GEE) was partitioned from NEE. Following the final flux measurements, biometric sampling was conducted to establish soil carbon (C) and nitrogen (N) content and the biomass components for each transect.ResultsA clear difference was found between the earlier and the later successional stage. The older successional stages in the lower altitudes acted as a stronger C sink, where NEE, GEE and Reco were significantly higher than in the earlier successional stage. Of the two lower transects, the sink capacity of intermediate-succession plots exceeded that of the plots of older formation, in spite of the more developed soil. Total biomass (above- and belowground) approached its maximum value in the intermediate ecosystem, whilst the later stage of succession predominated in the corresponding belowground organic mass (biomass, N and C).OutlookWe found that the process of carbon accumulation along a glacier retreat chronosequence is not linear, and after a quite rapid increase in carbon accumulation capacity in the first 150 years, in average 9 g C m-2 year-1, it slows down, taking place mainly in the belowground biomass components. Concurrently, the photosynthetic capacity peaks in the intermediate stage of ecosystem development. If confirmed by further studies on a larger scale, this study would provide evidence for a predominant effect of plant physiology over soil physical characteristics in the green-up phase after glacier retreat, which has to be taken into account in the creation of scenarios related to climate change and future land use.

Dataset Information

Potential sources of microbial colonizers in an initial soil ecosystem after retreat of an alpine glacier.

Publications

Potential sources of microbial colonizers in an initial soil ecosystem after retreat of an alpine glacier.

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