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Single-shot diffraction data from the Mimivirus particle using an X-ray free-electron laser.


ABSTRACT: Free-electron lasers (FEL) hold the potential to revolutionize structural biology by producing X-ray pules short enough to outrun radiation damage, thus allowing imaging of biological samples without the limitation from radiation damage. Thus, a major part of the scientific case for the first FELs was three-dimensional (3D) reconstruction of non-crystalline biological objects. In a recent publication we demonstrated the first 3D reconstruction of a biological object from an X-ray FEL using this technique. The sample was the giant Mimivirus, which is one of the largest known viruses with a diameter of 450 nm. Here we present the dataset used for this successful reconstruction. Data-analysis methods for single-particle imaging at FELs are undergoing heavy development but data collection relies on very limited time available through a highly competitive proposal process. This dataset provides experimental data to the entire community and could boost algorithm development and provide a benchmark dataset for new algorithms.

SUBMITTER: Ekeberg T 

PROVIDER: S-EPMC4968188 | biostudies-literature | 2016 Aug

REPOSITORIES: biostudies-literature

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Single-shot diffraction data from the Mimivirus particle using an X-ray free-electron laser.

Ekeberg Tomas T   Svenda Martin M   Seibert M Marvin MM   Abergel Chantal C   Maia Filipe R N C FR   Seltzer Virginie V   DePonte Daniel P DP   Aquila Andrew A   Andreasson Jakob J   Iwan Bianca B   Jönsson Olof O   Westphal Daniel D   Odić Duško D   Andersson Inger I   Barty Anton A   Liang Meng M   Martin Andrew V AV   Gumprecht Lars L   Fleckenstein Holger H   Bajt Saša S   Barthelmess Miriam M   Coppola Nicola N   Claverie Jean-Michel JM   Loh N Duane ND   Bostedt Christoph C   Bozek John D JD   Krzywinski Jacek J   Messerschmidt Marc M   Bogan Michael J MJ   Hampton Christina Y CY   Sierra Raymond G RG   Frank Matthias M   Shoeman Robert L RL   Lomb Lukas L   Foucar Lutz L   Epp Sascha W SW   Rolles Daniel D   Rudenko Artem A   Hartmann Robert R   Hartmann Andreas A   Kimmel Nils N   Holl Peter P   Weidenspointner Georg G   Rudek Benedikt B   Erk Benjamin B   Kassemeyer Stephan S   Schlichting Ilme I   Strüder Lothar L   Ullrich Joachim J   Schmidt Carlo C   Krasniqi Faton F   Hauser Günter G   Reich Christian C   Soltau Heike H   Schorb Sebastian S   Hirsemann Helmut H   Wunderer Cornelia C   Graafsma Heinz H   Chapman Henry H   Hajdu Janos J  

Scientific data 20160801


Free-electron lasers (FEL) hold the potential to revolutionize structural biology by producing X-ray pules short enough to outrun radiation damage, thus allowing imaging of biological samples without the limitation from radiation damage. Thus, a major part of the scientific case for the first FELs was three-dimensional (3D) reconstruction of non-crystalline biological objects. In a recent publication we demonstrated the first 3D reconstruction of a biological object from an X-ray FEL using this  ...[more]

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