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MCSM-AB: a web server for predicting antibody-antigen affinity changes upon mutation with graph-based signatures.


ABSTRACT: Computational methods have traditionally struggled to predict the effect of mutations in antibody-antigen complexes on binding affinity. This has limited their usefulness during antibody engineering and development, and their ability to predict biologically relevant escape mutations. Here we present mCSM-AB, a user-friendly web server for accurately predicting antibody-antigen affinity changes upon mutation which relies on graph-based signatures. We show that mCSM-AB performs better than comparable methods that have been previously used for antibody engineering. mCSM-AB web server is available at http://structure.bioc.cam.ac.uk/mcsm_ab.

SUBMITTER: Pires DE 

PROVIDER: S-EPMC4987957 | biostudies-literature | 2016 Jul

REPOSITORIES: biostudies-literature

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mCSM-AB: a web server for predicting antibody-antigen affinity changes upon mutation with graph-based signatures.

Pires Douglas E V DE   Ascher David B DB  

Nucleic acids research 20160523 W1


Computational methods have traditionally struggled to predict the effect of mutations in antibody-antigen complexes on binding affinity. This has limited their usefulness during antibody engineering and development, and their ability to predict biologically relevant escape mutations. Here we present mCSM-AB, a user-friendly web server for accurately predicting antibody-antigen affinity changes upon mutation which relies on graph-based signatures. We show that mCSM-AB performs better than compara  ...[more]

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