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MSAViewer: interactive JavaScript visualization of multiple sequence alignments.

ABSTRACT: The MSAViewer is a quick and easy visualization and analysis JavaScript component for Multiple Sequence Alignment data of any size. Core features include interactive navigation through the alignment, application of popular color schemes, sorting, selecting and filtering. The MSAViewer is 'web ready': written entirely in JavaScript, compatible with modern web browsers and does not require any specialized software. The MSAViewer is part of the BioJS collection of components.

Availability and implementation

The MSAViewer is released as open source software under the Boost Software License 1.0. Documentation, source code and the viewer are available at http://msa.biojs.net/Supplementary information: Supplementary data are available at Bioinformatics online.

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msa@bio.sh.

SUBMITTER: Yachdav G

PROVIDER: S-EPMC5181560 | biostudies-literature | 2016 Nov

REPOSITORIES: biostudies-literature

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MSAViewer: interactive JavaScript visualization of multiple sequence alignments.

Yachdav Guy G Wilzbach Sebastian S Rauscher Benedikt B Sheridan Robert R Sillitoe Ian I Procter James J Lewis Suzanna E SE Rost Burkhard B Goldberg Tatyana T

Bioinformatics (Oxford, England) 20160713 22

The MSAViewer is a quick and easy visualization and analysis JavaScript component for Multiple Sequence Alignment data of any size. Core features include interactive navigation through the alignment, application of popular color schemes, sorting, selecting and filtering. The MSAViewer is 'web ready': written entirely in JavaScript, compatible with modern web browsers and does not require any specialized software. The MSAViewer is part of the BioJS collection of components.<h4>Availability and im ...[more]

PMID: 27412096

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