Unknown

Dataset Information

0

Rare disruptive mutations in ciliary function genes contribute to testicular cancer susceptibility.


ABSTRACT: Testicular germ cell tumour (TGCT) is the most common cancer in young men. Here we sought to identify risk factors for TGCT by performing whole-exome sequencing on 328 TGCT cases from 153 families, 634 sporadic TGCT cases and 1,644 controls. We search for genes that are recurrently affected by rare variants (minor allele frequency <0.01) with potentially damaging effects and evidence of segregation in families. A total of 8.7% of TGCT families carry rare disruptive mutations in the cilia-microtubule genes (CMG) as compared with 0.5% of controls (P=2.1 × 10-8). The most significantly mutated CMG is DNAAF1 with biallelic inactivation and loss of DNAAF1 expression shown in tumours from carriers. DNAAF1 mutation as a cause of TGCT is supported by a dnaaf1hu255h(+/-) zebrafish model, which has a 94% risk of TGCT. Our data implicate cilia-microtubule inactivation as a cause of TGCT and provide evidence for CMGs as cancer susceptibility genes.

SUBMITTER: Litchfield K 

PROVIDER: S-EPMC5187424 | biostudies-literature | 2016 Dec

REPOSITORIES: biostudies-literature

altmetric image

Publications


Testicular germ cell tumour (TGCT) is the most common cancer in young men. Here we sought to identify risk factors for TGCT by performing whole-exome sequencing on 328 TGCT cases from 153 families, 634 sporadic TGCT cases and 1,644 controls. We search for genes that are recurrently affected by rare variants (minor allele frequency <0.01) with potentially damaging effects and evidence of segregation in families. A total of 8.7% of TGCT families carry rare disruptive mutations in the cilia-microtu  ...[more]

Similar Datasets

| EGAS00001001789 | EGA
| S-EPMC4917884 | biostudies-literature
| S-EPMC4136494 | biostudies-literature
| S-EPMC1288102 | biostudies-literature
| S-EPMC3766631 | biostudies-literature
| S-EPMC5127781 | biostudies-literature
| S-EPMC2613476 | biostudies-literature
| S-EPMC3459953 | biostudies-literature
| S-EPMC1838453 | biostudies-literature
| S-EPMC5141682 | biostudies-literature