Unknown

Dataset Information

0

Uncovering emergent interactions in three-way combinations of stressors.


ABSTRACT: Understanding how multiple stressors interact is needed to predict the dynamical outcomes of diverse biological systems, ranging from drug-resistant pathogens that are combated and treated with combination drug therapies to ecosystems impacted by environmental toxicants or disturbances. Nevertheless, extensive studies of higher-order (more than two component) interactions have been lacking. Here, we conduct experiments using 20 three-drug combinations and their effects on the bacterial growth of Escherichia coli We report our measurements of growth rates in single, pairwise and triple-drug combinations. To uncover emergent interactions, we derive a simple framework to calculate expectations for three-way interactions based on the measured impact of each individual stressor and of each pairwise interaction. Using our framework, we find that (i) emergent antagonisms are more common than emergent synergies and (ii) emergent antagonisms are more common and emergent synergies are more rare than would be inferred from measures of net effects that do not disentangle pairwise interactions from three-way interactions.

SUBMITTER: Beppler C 

PROVIDER: S-EPMC5221529 | biostudies-literature | 2016 Dec

REPOSITORIES: biostudies-literature

altmetric image

Publications

Uncovering emergent interactions in three-way combinations of stressors.

Beppler Casey C   Tekin Elif E   Mao Zhiyuan Z   White Cynthia C   McDiarmid Cassandra C   Vargas Emily E   Miller Jeffrey H JH   Savage Van M VM   Yeh Pamela J PJ  

Journal of the Royal Society, Interface 20161201 125


Understanding how multiple stressors interact is needed to predict the dynamical outcomes of diverse biological systems, ranging from drug-resistant pathogens that are combated and treated with combination drug therapies to ecosystems impacted by environmental toxicants or disturbances. Nevertheless, extensive studies of higher-order (more than two component) interactions have been lacking. Here, we conduct experiments using 20 three-drug combinations and their effects on the bacterial growth of  ...[more]

Similar Datasets

2019-10-02 | GSE138256 | GEO
2020-08-11 | GSE154112 | GEO
| S-EPMC4811573 | biostudies-literature
| S-EPMC4938094 | biostudies-literature
| S-EPMC2781753 | biostudies-literature
| S-EPMC7798263 | biostudies-literature
| S-EPMC3721169 | biostudies-literature
2015-11-04 | E-GEOD-74613 | biostudies-arrayexpress
| S-EPMC4150320 | biostudies-literature
| S-EPMC5722876 | biostudies-other