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Intron 1 GATA site enhances ALAS2 expression indispensably during erythroid differentiation.


ABSTRACT: The first intronic mutations in the intron 1 GATA site (int-1-GATA) of 5-aminolevulinate synthase 2 (ALAS2) have been identified in X-linked sideroblastic anemia (XLSA) pedigrees, strongly suggesting it could be causal mutations of XLSA. However, the function of this int-1-GATA site during in vivo development remains largely unknown. Here, we generated mice lacking a 13 bp fragment, including this int-1-GATA site (T AGATAA: AGCCCC) and found that hemizygous deletion led to an embryonic lethal phenotype due to severe anemia resulting from a lack of ALAS2 expression, indicating that this non-coding sequence is indispensable for ALAS2 expression in vivo Further analyses revealed that this int-1-GATA site anchored the GATA site in intron 8 (int-8-GATA) and the proximal promoter, forming a long-range loop to enhance ALAS2 expression by an enhancer complex including GATA1, TAL1, LMO2, LDB1 and Pol II at least, in erythroid cells. However, compared with the int-8-GATA site, the int-1-GATA site is more essential for regulating ALAS2 expression through CRISPR/Cas9-mediated site-specific deletion. Therefore, the int-1-GATA site could serve as a valuable site for diagnosing XLSA in cases with unknown mutations.

SUBMITTER: Zhang Y 

PROVIDER: S-EPMC5314798 | biostudies-literature | 2017 Jan

REPOSITORIES: biostudies-literature

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Intron 1 GATA site enhances ALAS2 expression indispensably during erythroid differentiation.

Zhang Yingchi Y   Zhang Jingliao J   An Wenbin W   Wan Yang Y   Ma Shihui S   Yin Jie J   Li Xichuan X   Gao Jie J   Yuan Weiping W   Guo Ye Y   Engel James Douglas JD   Shi Lihong L   Cheng Tao T   Zhu Xiaofan X  

Nucleic acids research 20161007 2


The first intronic mutations in the intron 1 GATA site (int-1-GATA) of 5-aminolevulinate synthase 2 (ALAS2) have been identified in X-linked sideroblastic anemia (XLSA) pedigrees, strongly suggesting it could be causal mutations of XLSA. However, the function of this int-1-GATA site during in vivo development remains largely unknown. Here, we generated mice lacking a 13 bp fragment, including this int-1-GATA site (T AGATAA: AGCCCC) and found that hemizygous deletion led to an embryonic lethal ph  ...[more]

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