Unknown

Dataset Information

0

Opposing macrophage polarization programs show extensive epigenomic and transcriptional cross-talk.


ABSTRACT: Stimulation of macrophages with interferon-? (IFN-?) and interleukin 4 (IL-4) triggers distinct and opposing activation programs. During mixed infections or cancer, macrophages are often exposed to both cytokines, but how these two programs influence each other remains unclear. We found that IFN-? and IL-4 mutually inhibited the epigenomic and transcriptional changes induced by each cytokine alone. Computational and functional analyses revealed the genomic bases for gene-specific cross-repression. For instance, while binding motifs for the transcription factors STAT1 and IRF1 were associated with robust and IL-4-resistant responses to IFN-?, their coexistence with binding sites for auxiliary transcription factors such as AP-1 generated vulnerability to IL-4-mediated inhibition. These data provide a core mechanistic framework for the integration of signals that control macrophage activation in complex environmental conditions.

SUBMITTER: Piccolo V 

PROVIDER: S-EPMC5524187 | biostudies-literature | 2017 May

REPOSITORIES: biostudies-literature

altmetric image

Publications

Opposing macrophage polarization programs show extensive epigenomic and transcriptional cross-talk.

Piccolo Viviana V   Curina Alessia A   Genua Marco M   Ghisletti Serena S   Simonatto Marta M   Sabò Arianna A   Amati Bruno B   Ostuni Renato R   Natoli Gioacchino G  

Nature immunology 20170313 5


Stimulation of macrophages with interferon-γ (IFN-γ) and interleukin 4 (IL-4) triggers distinct and opposing activation programs. During mixed infections or cancer, macrophages are often exposed to both cytokines, but how these two programs influence each other remains unclear. We found that IFN-γ and IL-4 mutually inhibited the epigenomic and transcriptional changes induced by each cytokine alone. Computational and functional analyses revealed the genomic bases for gene-specific cross-repressio  ...[more]

Similar Datasets

2017-03-02 | GSE84520 | GEO
2017-03-02 | GSE84519 | GEO
2017-03-02 | GSE84518 | GEO
2017-03-02 | GSE84517 | GEO
| PRJNA329530 | ENA
| S-EPMC7804107 | biostudies-literature
| S-EPMC6197058 | biostudies-literature
2020-11-10 | GSE161125 | GEO
| S-EPMC6286176 | biostudies-literature
| S-EPMC7378057 | biostudies-literature