Ontology highlight
ABSTRACT:
SUBMITTER: Durand NC
PROVIDER: S-EPMC5596920 | biostudies-literature | 2016 Jul
REPOSITORIES: biostudies-literature
Durand Neva C NC Robinson James T JT Shamim Muhammad S MS Machol Ido I Mesirov Jill P JP Lander Eric S ES Aiden Erez Lieberman EL
Cell systems 20160701 1
Hi-C experiments study how genomes fold in 3D, generating contact maps containing features as small as 20 bp and as large as 200 Mb. Here we introduce Juicebox, a tool for exploring Hi-C and other contact map data. Juicebox allows users to zoom in and out of Hi-C maps interactively, just as a user of Google Earth might zoom in and out of a geographic map. Maps can be compared to one another, or to 1D tracks or 2D feature sets. ...[more]