Unknown

Dataset Information

0

Novel Non-Histocompatibility Antigen Mismatched Variants Improve the Ability to Predict Antibody-Mediated Rejection Risk in Kidney Transplant.


ABSTRACT: Transplant rejection is the critical clinical end-point limiting indefinite survival after histocompatibility antigen (HLA) mismatched organ transplantation. The predominant cause of late graft loss is antibody-mediated rejection (AMR), a process whereby injury to the organ is caused by donor-specific antibodies, which bind to HLA and non-HLA (nHLA) antigens. AMR is incompletely diagnosed as donor/recipient (D/R) matching is only limited to the HLA locus and critical nHLA immunogenic antigens remain to be identified. We have developed an integrative computational approach leveraging D/R exome sequencing and gene expression to predict clinical post-transplant outcome. We performed a rigorous statistical analysis of 28 highly annotated D/R kidney transplant pairs with biopsy-confirmed clinical outcomes of rejection [either AMR or T-cell-mediated rejection (CMR)] and no-rejection (NoRej), identifying a significantly higher number of mismatched nHLA variants in AMR (ANOVA-p-value?=?0.02). Using Fisher's exact test, we identified 123 variants associated mainly with risk of AMR (p-value?

SUBMITTER: Pineda S 

PROVIDER: S-EPMC5723302 | biostudies-literature | 2017

REPOSITORIES: biostudies-literature

altmetric image

Publications

Novel Non-Histocompatibility Antigen Mismatched Variants Improve the Ability to Predict Antibody-Mediated Rejection Risk in Kidney Transplant.

Pineda Silvia S   Sigdel Tara K TK   Chen Jieming J   Jackson Annette M AM   Sirota Marina M   Sarwal Minnie M MM  

Frontiers in immunology 20171205


Transplant rejection is the critical clinical end-point limiting indefinite survival after histocompatibility antigen (HLA) mismatched organ transplantation. The predominant cause of late graft loss is antibody-mediated rejection (AMR), a process whereby injury to the organ is caused by donor-specific antibodies, which bind to HLA and non-HLA (nHLA) antigens. AMR is incompletely diagnosed as donor/recipient (D/R) matching is only limited to the HLA locus and critical nHLA immunogenic antigens re  ...[more]

Similar Datasets

| S-EPMC4632856 | biostudies-literature
| S-EPMC9005644 | biostudies-literature
| S-EPMC4483591 | biostudies-literature
| S-EPMC5791086 | biostudies-literature
| S-EPMC7228621 | biostudies-literature
| S-EPMC9317169 | biostudies-literature
| S-EPMC7920172 | biostudies-literature
| S-EPMC6133406 | biostudies-literature
| S-EPMC8456861 | biostudies-literature